Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01850 ATGACTAATCACCTTTTTTGCGCTTTCACTGTGCTTGCTCTCACTTTCTCTCTTCAGTTTCAAGCTCATGCTGCTCCTTCAGGATCATTAATCGAGCATCTGTCTTCATTTCTCAAATGGAGAAGGTCTAACTCCAAGATCCCTCAGTCAGATGGGAATGTTCTTCAATTTGAGAATGGTTATGTAGTAGAGACTGTTGTTGAAGGAAATGATATTGGGGTCATTCCTCATAGGATCCGTGTTTCGGCTGAAGATGGTGAACTCTTTGCTGTTGATGCAATTAATAGCAACATTGTTCGAATCACCCCGCCCTTATCCCAGTATAGTAGAGGAAGATTGGTGGCAGGGTCGTTTCAAGGCTACACTGGTCACGTAGATGGAAAACCAAGTGATTCTCGTTTCAATCATCCCAAAGGCATAACTGTGGATGATAAGGGGAATGTTTATGTTGCTGATACTCAAAATCTAGCTATCAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCAGGCTACAGGGATGGGCCCAGTGAGGATGCTAAGTTCTCAAATGATTTTGATGTGGTGTATGTTCGTCCAACGTGTTCCTTGTTGGTCATAGATAGAGGAAATGCTGCTCTTCGGCAAATCATTCTCAACCGGGAGGATTGTGATTATCAATCCAGTTCAATTTCTCTTACAGATGTCCTCACAGTTGTTGGTGCTGTTTTAGTAGGATACGCTACATTCAGGTTTCAGCAAGGATTTGGATCATCTTTCTTCCCCAAAACACAGCCACCATCAAAATGTGAATTCAAGGGCCAAGGCCATAAGGAGGAGACAGAATGGCCTTCTTTCAGCAAACTTCTTGTGTATCTTTCTAATCTCTCCCTGGAAACATTTAGTTCTTTCTTTCAATTCATACCATGGCGTTCCAAATCTGACAGCACCAAGAGAGGCCTGACACCTCTAAAAGATGGTCTTAAGATGCCAGAAGATGAGGTGGAGGCCCCCATGGGAGATATGCAAAGGACTTTTGATTCAGTTCTTACCGGAACTAAGCAAGTTCACACTCCAAGTACAGCTGAGAAATATTCAGAAATGAGGCCTGCAAAGATGAAACCAAGCTCTTCCAAGGATCCCTCTTTGTCAAGCAAGCACCATTCATTGAAAAGACAGGAGTATGCTGAGTTCTATGGATCAAGCGAGGTTCCATCTTATGCAAAATCCAAGAGCCAGAAGCAAAGGTCGAAGCATCGGCAACGAGAAAAGGTTGGACAAGTTCATTTGGGGGGTGTTGGAGCAGAGAAAAAACCAGTTGAGATGAGGGGTGTTGATTATGGTAATCCTAAGTTTGAGCATTACAATATGAGGACTAAATATGTCCCTGAGGATTCCTTCCGTTTCAAACCTCATTAA 1419 0.4306 MTNHLFCAFTVLALTFSLQFQAHAAPSGSLIEHLSSFLKWRRSNSKIPQSDGNVLQFENGYVVETVVEGNDIGVIPHRIRVSAEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDSRFNHPKGITVDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIILNREDCDYQSSSISLTDVLTVVGAVLVGYATFRFQQGFGSSFFPKTQPPSKCEFKGQGHKEETEWPSFSKLLVYLSNLSLETFSSFFQFIPWRSKSDSTKRGLTPLKDGLKMPEDEVEAPMGDMQRTFDSVLTGTKQVHTPSTAEKYSEMRPAKMKPSSSKDPSLSSKHHSLKRQEYAEFYGSSEVPSYAKSKSQKQRSKHRQREKVGQVHLGGVGAEKKPVEMRGVDYGNPKFEHYNMRTKYVPEDSFRFKPH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01850 472 Pfam NHL repeat 134 160 IPR001258 GO:0005515
Phco9g01850 472 Gene3D - 38 218 IPR011042 -
Phco9g01850 472 MobiDBLite consensus disorder prediction 403 451 - -
Phco9g01850 472 MobiDBLite consensus disorder prediction 350 390 - -
Phco9g01850 472 PANTHER - 27 461 - -
Phco9g01850 472 SUPERFAMILY NHL repeat 59 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01850 Phco-Chr9 42964955 42968956 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01850 9 42964955 42968956 Phco9g01850 9 42964955 42968956 ECH