Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01708 ATGCAGAAATTGCTGCATGCAAACAAAATGGCACTTCTTCCAGCTATGTTTCTTTCCCTAAACCTACTATTTTTTCTCTCTCAAATTTCCCATGCAACTGACACCATTTCTAAGTCTCAACCACTTCTTAATGGAAGCACCTTGGTCTCCAAAGATGGAACCTTCGAGTTGGGTTTCTTCACTCCCGGTAGTTCCACAAACAACTACCTTGGAATCTGGTTCAAAAACATTCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGACAACCCTTCAAAACATAAATCCAACATGTTGTCTCTAAACAAAGAGGGAAACCTCGTACTTCTCAGCCAAAACCGGTCTGTTGTTTGGTCGACAAATGCAACAACAATGGTTTTGAATCCCGTTGTGCAACTTTTAGACAATGGAAATTTAGTAATTAGAGATCAGAAGGATAACAGCAACAATGAAGATAGTTTTGTGTGGCAGAGCTTTGACCATCCTTGTGATACACTCTTGCAAGGAATGAAGTTGGGGTGGAACCTTAAAACTGGTCTCAATAGGTATCTTAGAGCTTGGAAAAGTTGGGATGACCCTTCTTCCGGAGATTTTACTTCTGGTGTGAAGCTTGGGGTCAATCCTGAATTGGCAATATGGAAAGGCTCGGTTGAGTACTATCGGAGTGGTCCTTGGAATGGGATTTTTTCTAGTGGGGTATTTGGTTTCAGTCCAAATCCACTTTTTGATTATAAACATGTTCAGAATGAAGATGAAGTGTATGTTAGGTACACTCTGAAGAATAGTTCTGTGATTTCTATAATTGTTTTGAACCAAACCCTTTATCTTCGCCAACGCATTACATGGATTCCTCACACAAGAACTTGGAGTGTGTACCAATCCCTGCCACAGGACAGTTGTGATGTTTACAATGTTTGTGGTGCATATGGGAGTTGTGTGATTAACGCGTCCCCAGTGTGTGCATGCTTGGAGGGGTTCAAGCCAAAATCACCCCAAGATTGGAATCAAATGGATTGGACACAAGGGTGTGTGCATAGTGAACCATTGAGTTGTGGAGTCAAAAATAGAGATGGGTTTCGTAAAATTTCTGGGATGAAAATGCCGGATACCTCACATTCTTGGATAAATCAAAATATGACACTTGAAGATTGCAGGGCCAAATGCTTGGAAAATTGTTCTTGTACTGCTTATGCGAACTTGGACACAAGTGGGGGAGGTAGTGGTTGCTCCATTTGGTTTGGTGATCTTTTTGATCTGAGAGTTTCAGAAAGTGGGCAAGATCTATATGTTCGAATGGCCACTTCAGATACGGATGCTAAACATAATAAGCATTCAAAAAAGTTAGTCTCCTTGGTCTCAATCCCAGTTTCTCTTGTCCTTCTGCTTCTATTGGCATTCTCCTACATTTTCATGACCAGAAAAAACTGTAAAGAAAATGGAATATGGACGAAGGAGAAAGATGATGGAGGGCAAGAAAATTTGGAGCTTCCTTTCTTTGATCTTGCAACAATAAGTAATGCCACCAATAACTTCTCAATTGATAACAAGCTTGGTGAAGGTGGTTTTGGACCTGTATATAAGGGTACAATGCTAGATGGACAAGAGATTGCAGTTAAAAGGCTCTCAAGGAGTTCAGGACAAGGATAG 1647 0.4092 MQKLLHANKMALLPAMFLSLNLLFFLSQISHATDTISKSQPLLNGSTLVSKDGTFELGFFTPGSSTNNYLGIWFKNIPVRTVVWVANRDNPSKHKSNMLSLNKEGNLVLLSQNRSVVWSTNATTMVLNPVVQLLDNGNLVIRDQKDNSNNEDSFVWQSFDHPCDTLLQGMKLGWNLKTGLNRYLRAWKSWDDPSSGDFTSGVKLGVNPELAIWKGSVEYYRSGPWNGIFSSGVFGFSPNPLFDYKHVQNEDEVYVRYTLKNSSVISIIVLNQTLYLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGSCVINASPVCACLEGFKPKSPQDWNQMDWTQGCVHSEPLSCGVKNRDGFRKISGMKMPDTSHSWINQNMTLEDCRAKCLENCSCTAYANLDTSGGGSGCSIWFGDLFDLRVSESGQDLYVRMATSDTDAKHNKHSKKLVSLVSIPVSLVLLLLLAFSYIFMTRKNCKENGIWTKEKDDGGQENLELPFFDLATISNATNNFSIDNKLGEGGFGPVYKGTMLDGQEIAVKRLSRSSGQG 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01708 548 CDD B_lectin 39 162 IPR001480 -
Phco9g01708 548 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Phco9g01708 548 Pfam D-mannose binding lectin 81 188 IPR001480 -
Phco9g01708 548 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Phco9g01708 548 SMART ntp_6 354 432 IPR003609 -
Phco9g01708 548 Pfam PAN-like domain 351 419 IPR003609 -
Phco9g01708 548 CDD PAN_AP_plant 348 433 - -
Phco9g01708 548 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 548 - -
Phco9g01708 548 Pfam S-locus glycoprotein domain 220 330 IPR000858 GO:0048544
Phco9g01708 548 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 193 IPR036426 -
Phco9g01708 548 SUPERFAMILY Protein kinase-like (PK-like) 495 543 IPR011009 -
Phco9g01708 548 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 350 432 - -
Phco9g01708 548 Gene3D Hepatocyte Growth Factor 350 433 - -
Phco9g01708 548 Gene3D Phosphorylase Kinase; domain 1 476 548 - -
Phco9g01708 548 SMART blect_4 39 162 IPR001480 -
Phco9g01708 548 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Phco9g01708 548 ProSiteProfiles Protein kinase domain profile. 511 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01708 548 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 159 - -
Phco9g01708 548 Gene3D - 26 159 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01708 Phco-Chr9 40256348 40258623 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01708 9 40256348 40258623 Phco9g01708 9 40256348 40258623 ECH