Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01651 ATGAGGGTTATTGTTTTTTCTCTAACTCTTTTCCTCACAACAGTCCAACTCCTTGTGAAAGCAGAATCAATAAGCAGAGCAGATTTTCCAAAGGGGTTTATATTTGGAACTGCTTCTTCAGCTCACCAGTTTGAGGGAGCTGCTGATGAAGGAAACAAAGGAGATAGCATATGGGATACTTTCTCAAGGATTCCAGGGAGAATTGTGGATTTCAGTAATGCGGACATGGCAGTGGATCAATACCACCGATTTCAGAATGATGTAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCGTGGACGAGAATTTTCCCAAATGGAACAGGGGAACCCAACAAAGAGGGAATCACATATTACAACAGCCTCATTGATGCTTTGCTTGAAAAAGGAATTCAGCCTTTTGTGACACTATACCATTGGGATCTTCCTCAAATGCTTGAAGATGAATATGAAGGATGGTTAAGCACACAAATCATAAAAGATTTTGAGCATTACGCATATACATGCTTCAAAGCTTTTGGAGACAGAGTTAAGCACTGGATTACCTTCAATGAGCCTCATAACTTTGCACTCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTGTTAGGTCGTCTTCTATGCAAGAAGGGAAAATCATCCACTGAGCCATACATTGTTGCTCATAACATTCTCTTATCTCATGCTGCTGCATACAGAAGCTACCAACTACATTTCAAGGAACAACAAGTAGGTGAAATAGGAATAGCACTAGATGTTATTTGGTATGAACCAATAACAGAACTTGATGAAGACAAAGATGCAGCATTAAGAGCTATGGACTTCTCACTTGGATGGTTCCTTGATCCACTTTTCTTTGGAAAATACCCTCTCTCAATGAAGAAACTTGTAGGTGAGAGATTACCAGAGATTTCTTATGCAAACTCAAAGTTTCTTGTGGGATCTTTGGATTTTATTGGCATAAATCATTACACCTCAGTATATACTCGTAACGATAGGACTAGGATTCATAAACTGGTTATGCAAGATGCTGTTTCTGATGCTGCTGTTATTACAACAGCATACCGAAGAGGAGCTGCAATTGGAGAAAAGGCAGCTTCAAGTTGGTTGCACATTGTCCCATGGGGTATCCGAAAGTTGGTAAAACATGTGAAAGACAAATATGGGGACACACCAGTAATTATAACAGAGAATGGAATGGATGACCCAAGCCAACCCTTTATGACCTTACAGAAGGCCTTAAAAGATGACAAGAGGATAAGATACCATAGAGACTATCTCTCAAACCTATCTGCTGCTATAAGGCAAGATGATTGCAATGTACGAGGTTACTTTGTATGGTCATTGCTTGACAACTGGGAGTGGAACATGGGATACACTGTACGGTTTGGACTCTACTATGTGGATTTCAAGAATAATCTTACTAGAATACCAAAAGATTCTATGAAATGGTTCAAAAACATACTCAGAATAGAGACAGAAAGGAGTAGTGAAATTTGA 1527 0.3929 MRVIVFSLTLFLTTVQLLVKAESISRADFPKGFIFGTASSAHQFEGAADEGNKGDSIWDTFSRIPGRIVDFSNADMAVDQYHRFQNDVNLMKDLGMDSYRFSISWTRIFPNGTGEPNKEGITYYNSLIDALLEKGIQPFVTLYHWDLPQMLEDEYEGWLSTQIIKDFEHYAYTCFKAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGRLLCKKGKSSTEPYIVAHNILLSHAAAYRSYQLHFKEQQVGEIGIALDVIWYEPITELDEDKDAALRAMDFSLGWFLDPLFFGKYPLSMKKLVGERLPEISYANSKFLVGSLDFIGINHYTSVYTRNDRTRIHKLVMQDAVSDAAVITTAYRRGAAIGEKAASSWLHIVPWGIRKLVKHVKDKYGDTPVIITENGMDDPSQPFMTLQKALKDDKRIRYHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDFKNNLTRIPKDSMKWFKNILRIETERSSEI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01651 508 FunFam Beta-glucosidase 12 14 500 - -
Phco9g01651 508 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 33 47 IPR033132 -
Phco9g01651 508 PRINTS Glycosyl hydrolase family 1 signature 471 483 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 PRINTS Glycosyl hydrolase family 1 signature 402 410 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 PRINTS Glycosyl hydrolase family 1 signature 447 464 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 PRINTS Glycosyl hydrolase family 1 signature 324 338 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 PRINTS Glycosyl hydrolase family 1 signature 425 436 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 SUPERFAMILY (Trans)glycosidases 16 498 IPR017853 -
Phco9g01651 508 Pfam Glycosyl hydrolase family 1 27 499 IPR001360 GO:0004553|GO:0005975
Phco9g01651 508 Gene3D Glycosidases 15 500 - -
Phco9g01651 508 PANTHER GLYCOSYL HYDROLASE 28 501 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01651 Phco-Chr9 39013199 39018145 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01651 9 39013199 39018145 Phco9g01651 9 39013199 39018145 ECH