Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01650 ATGGCGACGAGGGCAGCAGTGGCGGCGCCACACCTTTTGCGACGCTTCTTCTGCTCAAACTCCGCTTCTTCTTCTTTCCCCTTCGTTCCTACACCGCCTCCGGGCGCCGTCCCCAGCCCCGCCCGACCCACGGCGGAGCCCAACAACAACCTCTTTGTCTCCGGGCTTAGCAAACGGACTACTACAGAAAAGCTTCGGGAAGAATTTTCAAAGTTTGGTGAAGTTGTTCAAGCAAGGGTGGTAACTGATCGAGTCTCAGGCTACTCTAAGGGGTTTGGTTTTGTGAAATATGCAACATTAGAAGAGGCTGCAAAGGGCATTGAAGGAATGGATGGCAAGTTTTTGGACGGCTGGGTTATATTTGCAGAGTATGCGAGACCAAGACCACCACCAGGACATTTAAATGACAACAGTCCTCAGTTCGGCCGGCAGTGA 435 0.5264 MATRAAVAAPHLLRRFFCSNSASSSFPFVPTPPPGAVPSPARPTAEPNNNLFVSGLSKRTTTEKLREEFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGHLNDNSPQFGRQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01650 144 SMART rrm1_1 50 123 IPR000504 GO:0003723
Phco9g01650 144 Gene3D - 30 133 IPR012677 -
Phco9g01650 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Phco9g01650 144 PANTHER NUCLEOLAR PROTEIN 8 21 132 - -
Phco9g01650 144 FunFam RNA recognition motif-containing protein 28 139 - -
Phco9g01650 144 SUPERFAMILY RNA-binding domain, RBD 40 139 IPR035979 GO:0003676
Phco9g01650 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01650 Phco-Chr9 38978802 38981404 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01650 9 38978802 38981404 Phco9g01650 9 38978802 38981404 ECH