Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01631 ATGTCTAAACTATCTTCATTATCACTTCCGGTTTTCCCACAGGATGCCAAACCTAGACACTCTGCAAACTTTCATCCTTCCATTTGGGGTGATTATTTCCTTTCCTATGATTCTAGTTTGCATGAAGATGATAGCGACATCAAACAAGTTCCACTGTTGAAAGAATATGTGAGGAAGATGATTGTCTCTCCTGTTGATAACAACTTCCTTTTCAAATTAAACTTCATCAACTCAGTCCAGCGTTTAGGTGTTTCTTATCATTTTGAACATGAAATTGATGAAGCCTTGCATCAAATCTATGAGAATTCAACAAAGGAGAATAATATAGTAAGTTACGATGATGATCTTCATCATCTCGCTTTGCTCTTTCGGTTGCTTAGACAACAAGGATATCGTATTTCATCAGATGTATTTTGCAAATTCAAGGACCAAGAAGGAAACTTCAAGGAAAGCATTCTGAATGATATACAAGGAATGTTAAGCTTGTATGAAGCAGCACAATTAAGCTTCCATGGAGAAGAGATACTGCAAGAAGCATATAGTTTTACTCTCACTCACTTAACTGAGTCATTAACCACCAAATTAAGTCCCTTTCTTTCTGGGTTAGTGCGCCATAGCTTAGGACAGTCACTTCGCAAGGGAATGCCTAGGTTGGAGTCAAGATATTATATATCATTCTACCAAGAAGATCCCTCACATGATGAACGTTTGTTAACCTTTGCAAAACTAGATTTTAATATGTTACAGAAGCTCCATCAAAAAGAAGTCAGCAATATGACCAAGTGGTGGGTTAAAGATTTGAATGTCTCCACAAATTTTCCTTTTGCACGAGATAGGATTGTTGAAGGTTGCTTTTGGATTGTTGGTGTTTATTATGAACCACAATATTTACTTGCTAGAAGAATACTGATGAAAGTAATAGCCATATCATCCATCATTGATGATGTGTATGATGCCTATGGAACCATTGATGAGATAGAGATTTTCACCAATGCAATAGAAAGGTGGGATATCTCCTCATTGAATGATCTACCAGAATATATGAAATTATGTTATAAGGCACTTTTGGATATCTTTGAAGAAACAGAGCAGGAGTTGAGAAATCAAGGAAAACAAAACTTCGTGAAGTATGCTAAAAATGAAGTGAAACGATTGGTCCAAGCCTACCGTACTGAGTCAAGATGGTTTCATCAGAACCACACACCAACCACAGAGGAGTACATGGAAGTTGCAACTATGTCATGTGGTTTTGCTTTGTTGACAACTGTATCGTTCTTGGGCATGGAAGATACTACAGAGGAGTTCCTCACATGGGCAACCAATGACCCAAAAATTATTGTAGCTGCTTCAACTATTTGCAGGCTCATGGATGACATTGCTGGAAGTGAGTTTGAACAAGAAAGAGGACACGTTGTCTCAAGCCTTGATTGCTATATGAAGCAATATAACAGCTCAAGGGAAAATGCCATTAAAGAACTGCTTAAGTTGGTGGAGAGTAGTTGGAAGGACATTAATGAAGAATGCCTTAATCCTACTCAAGTACCAATGAAGTTTCTCATGCGTGTTGTGAACCTTGCACGAATGATGGACGTACTTTACAAAGAACGAGATAGTTATACACATTCAGGAGGAATATTGAAGGATTATATCAATGCTTTACTAGTTAATAAGTTGTCCATACAAATAAGCTAA 1692 0.3735 MSKLSSLSLPVFPQDAKPRHSANFHPSIWGDYFLSYDSSLHEDDSDIKQVPLLKEYVRKMIVSPVDNNFLFKLNFINSVQRLGVSYHFEHEIDEALHQIYENSTKENNIVSYDDDLHHLALLFRLLRQQGYRISSDVFCKFKDQEGNFKESILNDIQGMLSLYEAAQLSFHGEEILQEAYSFTLTHLTESLTTKLSPFLSGLVRHSLGQSLRKGMPRLESRYYISFYQEDPSHDERLLTFAKLDFNMLQKLHQKEVSNMTKWWVKDLNVSTNFPFARDRIVEGCFWIVGVYYEPQYLLARRILMKVIAISSIIDDVYDAYGTIDEIEIFTNAIERWDISSLNDLPEYMKLCYKALLDIFEETEQELRNQGKQNFVKYAKNEVKRLVQAYRTESRWFHQNHTPTTEEYMEVATMSCGFALLTTVSFLGMEDTTEEFLTWATNDPKIIVAASTICRLMDDIAGSEFEQERGHVVSSLDCYMKQYNSSRENAIKELLKLVESSWKDINEECLNPTQVPMKFLMRVVNLARMMDVLYKERDSYTHSGGILKDYINALLVNKLSIQIS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01631 563 PANTHER OS04G0344100 PROTEIN-RELATED 19 541 - -
Phco9g01631 563 Gene3D Farnesyl Diphosphate Synthase 26 548 IPR008949 -
Phco9g01631 563 Gene3D - 67 233 IPR036965 GO:0010333|GO:0016829
Phco9g01631 563 FunFam Isoprene synthase, chloroplastic 198 548 - -
Phco9g01631 563 Pfam Terpene synthase, N-terminal domain 28 207 IPR001906 GO:0010333|GO:0016829
Phco9g01631 563 Pfam Terpene synthase family, metal binding domain 238 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco9g01631 563 FunFam Isoprene synthase, chloroplastic 67 233 - -
Phco9g01631 563 SFLD Isoprenoid Synthase Type I 235 558 - -
Phco9g01631 563 SUPERFAMILY Terpenoid synthases 233 559 IPR008949 -
Phco9g01631 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 25 233 IPR008930 -
Phco9g01631 563 CDD Terpene_cyclase_plant_C1 19 556 IPR044814 GO:0010333|GO:0016102
Phco9g01631 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 235 558 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01631 Phco-Chr9 38422341 38426664 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01631 9 38422341 38426664 Phco9g01631 9 38422341 38426664 ECH