Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01556 ATGGATGCACCAAAGTTTCAGTTGCACATAGCAATGTACCCATGGTTTGGTATTGGACACATATCAGCATATCTCCACCTAGCCAACAAATTAGCCAAAAGAGGACACAAAATTTCCTTCATCGTACCCAAACGAACAAAGTCCAAGGTGGAACATTTCAACCTCTATCCACAGTTAGTAACCTTCATCCCCATCACCATGCCCCTAGTTGATGGCCTTCCTCATCATGCAGAAACCACTTTTGATGCTACCATCTCCTTAGGCAAACTCATTATGACTGGGATGGATCGCACTGAGAAGGATATTGAACTACTTTTGCTTGAGCTAAAACCCAACATTGTTTTCTTTGATTATACATGTTGGATGCCGAACTTGGCTCGGAGCTTAGGGATCAAGTCTGTTCATTACATAACCCTAAGCATGATATTTGAATCGTACATGGAATGCATGGAGAAGCAATTTAGTGAAAAGAATATAGCTGGACATGAGCTGAATCTGTTGAATCCTCCAGCTGGGTTCCCAGATCCTTCCATCAAGCTTCAGGCTCACGAGGTTCGACAATTAACTTCAGTCGTGAATTCCGAATTTGGCAGTGGTGTTCGTTATTATGACCGGATCAGCACCAGCACCAGATTGTCAGATGCAGTGGCCTTTAGAGGCTGTAGAGAAATTGAGGGACTATATGCTGACTTTCTCGAAATTTCTTATCGAAAGCCTTTGTTGCTTTCAGGGCCTGTCATACCTGAGCCACACACATCCCCTTTGGAAGAAGAATGGGCTGAATGGCTTTCAGGATTCAAGGAGGGATCGGTGGTGTACTGTGCATTTGGAAGTGAATGCAGGCTACATCAAGATCAGCTCAAGGAACTGTTGGTGGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCTCTTAAAGCCCCTGTTGGAATTGAGTCTGTTGAAGCAGCTATGCCAAAAGGGTTCAGTGAGAGGGTTCGAGGAAGAGGCATTGTTCATGGCAGTTGGGTTCAGCAGACACTAATTCTTGACCACCCTTCTATAGGGTGCTTCATTACCCATTGTGGGGTTGCATCTTTACTAGAGGCACTTGTGAGCAATTGTCAAATTGTGGTGTTACCAAATTTTATTGATCAGCTCCTTAATGCGAGGATGATAAGCAGCAGCATAAAGGCTGGTGTTCAAGTGGAGAAAGGTGAAGAAGACGGTTTGTTCACAAAGGAAAGTGTCTGTGCAGCTGTTAAGACTGTGATGGATTTGGAGAGTGAGGTTGGAAGGGAGGTCAGAGAAAACCATTTAAAATTGAGAAATCTCTTACTCACCAAAGATTTGGAGAACAATTACCTTGATGGTTTTTGTCACAAGCTTCAAGAACTAGTTGGGTGA 1386 0.4365 MDAPKFQLHIAMYPWFGIGHISAYLHLANKLAKRGHKISFIVPKRTKSKVEHFNLYPQLVTFIPITMPLVDGLPHHAETTFDATISLGKLIMTGMDRTEKDIELLLLELKPNIVFFDYTCWMPNLARSLGIKSVHYITLSMIFESYMECMEKQFSEKNIAGHELNLLNPPAGFPDPSIKLQAHEVRQLTSVVNSEFGSGVRYYDRISTSTRLSDAVAFRGCREIEGLYADFLEISYRKPLLLSGPVIPEPHTSPLEEEWAEWLSGFKEGSVVYCAFGSECRLHQDQLKELLVGLELTGFPFLAALKAPVGIESVEAAMPKGFSERVRGRGIVHGSWVQQTLILDHPSIGCFITHCGVASLLEALVSNCQIVVLPNFIDQLLNARMISSSIKAGVQVEKGEEDGLFTKESVCAAVKTVMDLESEVGREVRENHLKLRNLLLTKDLENNYLDGFCHKLQELVG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01556 461 Gene3D Glycogen Phosphorylase B; 5 259 - -
Phco9g01556 461 FunFam Glycosyltransferase 5 258 - -
Phco9g01556 461 Gene3D Glycogen Phosphorylase B; 260 440 - -
Phco9g01556 461 Coils Coil 456 461 - -
Phco9g01556 461 ProSitePatterns UDP-glycosyltransferases signature. 336 379 IPR035595 -
Phco9g01556 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 444 - -
Phco9g01556 461 CDD GT1_Gtf-like 8 436 IPR002213 GO:0008194
Phco9g01556 461 PANTHER GLYCOSYLTRANSFERASE 8 453 - -
Phco9g01556 461 FunFam Glycosyltransferase 259 441 - -
Phco9g01556 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 422 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01556 Phco-Chr9 36276643 36278028 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01556 9 36276643 36278028 Phco9g01556 9 36276643 36278028 ECH
Phco10g01087 10 32341330 32342772 Phco9g01556 9 36276643 36278028 PCT