Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01490 ATGGCTGACGGAACAACTGTTAGCAACCTGCCGGAGGAGATCCTGTTGAACGTCTTCTCCGCCGTCTCCGACACGCGCACGCGAAACTCGCTGTCCCTGGTGTGTCGAAGCTTCTTCCGCTTGGAGCGCAAGACGCGCATCTCGCTCACGCTGCGCGGGAACGCGCGTGACCTGCACCTCATCCCGACCTCCTTCATGCACGTCACACACCTCGACATCTCCTTCCTCTCGCCGTGGGGCCACGCGCTTTTCTGCTCCTCCGCCACCAACACCTTCGACCCGCGCCTCCTAGCGCTCCGCCTCCGCGACGCCTTCCCGCACGTCACCTCGCTCGCCGTCTACGCGCGCGACCCCCTTACGCTCCACCTCCTCCTCCTCTCCCCCTGGCCGGAGCTCTCCAGCGTCAAGCTCGTGCGCTGGCACCAGCGCCCGCCGACGTCGCCCGCGGGATCCGACTTCGCCAAGCTGTTCTCACAGTGCCGATCGCTCGCCTCGCTCGACCTCTCCTCGTTCTACCACTGGCCAGAGGACCTTCCGCCTGTGCTGGCGGCCAACCCTGACACTGCTGCCTCGCTCCGCCGCCTCAACCTCTTGACAACTTCCTTCACGGAGGGTTTCAAGTCTCATCAAATCGAATCCATCACCGCGTCGTGTCCTAACCTGGAGCACTTTCTCGTGGCCTGCAAATTCGATCCGAGATATATAGGGTTCGTTGGGGACGACACGCTGGTTGCTATTCCCTCCAATTGCCCTAAGCTCTCGCTGCTTCACTTGGCCGATACGTCGTCGTTTTCAAATCGCAGAGAGAACGAGGGTTTCGGGGGAGAAGAAGGTAGGGTTACCCGTGCTACTCTTGTGACTTTGTTCTCTGGACTTCCTCTTTTGGAAGAGTTGGTGTTAGATGTCTGTAAAAATGTGAGAGATAGCAGTTTGGCGTTGGAAGTGTTGGGTTCGAAGTGCCCTAATTTGAGGGTTCTGAAGTTAGGCCAGTTTCAAGGGATTTGCTTAGCCCTTGGGTCAAAGCTTGACGGAGTTGCCCTCTGCCATGGGCTTCAATCTTTGTCAGTTGGTAACTGCGCGGACCTTGATGACATGGGGTTGATTGAGATTGCTAGAGGGTGTTCCAGGCTTGTTAGGTTCGAGGTTCAGGGTTGCAACCTTGTGACTGAGCAGGGGCTTAGGACCATGGCTTGTTTGCTTAGCAGGACTATGATTGATGTCAAGGTTTCTAGTTGCGTCAACCTCGACGCTGCCGCTACTCTCAGAGCTTTGGAGCCCATTCGCAACCGGATTGAGCGGCTCCATGTGGATTGTGTGTGGAATGGTTTGAAGGAAAGTGATGGATTGGGGCATGGGTTTCTCAATTTTGATCTGAATGGTTTAGATGAACTGGATGGTGGTGGTGGTGGTGGTGAGTTAATGGATTACTTTGGGGGTGGAGAATGTGAGAATACAAGCAAAAGGAAGAGGCAGAGATGCAAGTACGAAATGGGGATTCATGATTCCTTTTTGGAAAGCAATGATAATGGTTTCTATGGCAAGTGCTGGGACAAGCTGCGGTATCTTTCTCTTTGGATAAAAGTTGGTGATCTGTTGACTCCATTGCCAGTGGCAGGGTTGGAGGATTGTCCCAGTTTGGAAGAGATTCTTATAAAGGTTGAAGGAGATAGCAGGGGGCAACAGAAACCAGCAGAGCGGGAGTTTGGTCTGAGCATTCTGGCTTGTTATCCTCAGCTATTGAAGATGCAGCTGGACTGTGGTGATACTAAAGGTTATGCCCTCACAGCACCATCAGGGCAAATGGATTTGAGCCTGTGGGAGAGGTTCTTTCTGAATGGGATTGGCAGTTTGAGTCTGAATGAGCTTCATTACTGGCCACCACAAGATGAGGATGTGAACCAGAGGAGTGTATCACTTCCAGCAGCTGGTTTGCTTCAAGAATGTTACACTTTGAGGAAGCTCTTCATTCACGGGACAGCTCATGAGCATTTCATGAATTTTTTCCTCAAGACACCAAACCTAAGGGATGTACAGCTGAGGGAGGATTATTACCCGGCTCCTGAGAATGACATGAGCACAGAGATGAGAGTGGCCTCGTGCAGCCGCTTTGAAGATGCACTCAACAGGCGTCAAATCTGTGATTGA 2145 0.5315 MADGTTVSNLPEEILLNVFSAVSDTRTRNSLSLVCRSFFRLERKTRISLTLRGNARDLHLIPTSFMHVTHLDISFLSPWGHALFCSSATNTFDPRLLALRLRDAFPHVTSLAVYARDPLTLHLLLLSPWPELSSVKLVRWHQRPPTSPAGSDFAKLFSQCRSLASLDLSSFYHWPEDLPPVLAANPDTAASLRRLNLLTTSFTEGFKSHQIESITASCPNLEHFLVACKFDPRYIGFVGDDTLVAIPSNCPKLSLLHLADTSSFSNRRENEGFGGEEGRVTRATLVTLFSGLPLLEELVLDVCKNVRDSSLALEVLGSKCPNLRVLKLGQFQGICLALGSKLDGVALCHGLQSLSVGNCADLDDMGLIEIARGCSRLVRFEVQGCNLVTEQGLRTMACLLSRTMIDVKVSSCVNLDAAATLRALEPIRNRIERLHVDCVWNGLKESDGLGHGFLNFDLNGLDELDGGGGGGELMDYFGGGECENTSKRKRQRCKYEMGIHDSFLESNDNGFYGKCWDKLRYLSLWIKVGDLLTPLPVAGLEDCPSLEEILIKVEGDSRGQQKPAEREFGLSILACYPQLLKMQLDCGDTKGYALTAPSGQMDLSLWERFFLNGIGSLSLNELHYWPPQDEDVNQRSVSLPAAGLLQECYTLRKLFIHGTAHEHFMNFFLKTPNLRDVQLREDYYPAPENDMSTEMRVASCSRFEDALNRRQICD 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01490 714 SMART LRR_CC_2 292 317 IPR006553 -
Phco9g01490 714 SMART LRR_CC_2 348 373 IPR006553 -
Phco9g01490 714 SMART LRR_CC_2 374 399 IPR006553 -
Phco9g01490 714 SUPERFAMILY RNI-like 154 407 - -
Phco9g01490 714 PANTHER UNCHARACTERIZED 9 435 - -
Phco9g01490 714 ProSiteProfiles F-box domain profile. 4 51 IPR001810 GO:0005515
Phco9g01490 714 CDD F-box_AtTIR1-like 8 46 - -
Phco9g01490 714 Pfam F-box 8 46 IPR041567 -
Phco9g01490 714 Gene3D Ribonuclease Inhibitor 19 448 IPR032675 -
Phco9g01490 714 FunFam F-box/LRR-repeat protein 4 7 46 - -
Phco9g01490 714 SUPERFAMILY F-box domain 3 43 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01490 Phco-Chr9 34816535 34818679 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01490 9 34816535 34818679 Phco9g01490 9 34816535 34818679 ECH