Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01471 ATGGCCAAGTTACTGTCTCCAGTGTACACAGAACCTCTCAAACTGCATAACCCATTACTGAATTTTTGTTCCAGAAGCTCATGGAGGATGCTGCCAAAGACTGCAACCCCCATGAACTTTGTGACACACAATGGCAAACGAAGAGGGTGTGCCAGGGTTAGAGTTGCTGCTGGGGAAAAATCGTTTTCAACAAGTGAGACTGTTGCAGATGACTACTATGCAGTTCTGGGTCTGCTTCCAGATGCCACTCCAGCACAGATCAAGAAGGCCTACTACAATTGCATGAAAGCTTGCCATCCAGACTTGAGTGGCAATGATCCAGAGACAACCAATTTCTGCACGTTCATCAATGAAGTTTATGGGGTGCTCAGTGATCCCATTCAGCGCATGATTTATGATGAAATTCATGGGTATTCTTTGACTTCCATTAACCCTTTTCTGGATGAGTCTAGTCCAAAGGATCATGTTTTTGTTGATGAATTCAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTGCCTGTGATGTGTTTGGCATAGAGGAGGAATTTGGAAGAGCCAGAGCATACAGCCAATGCGGGAAATCTGACTTAGTTCAACAGGCTATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCAGCTGCACAACTATCATTACTAGAAGACGAAATGCGCCGTGTAGAAAGAGTCAATGTTGCCTTAATGCTTTCAGGAATGGGATCAGCATCAACTGATGTTTTTAGAATGGCAAGTTCACGATGGGAAAAGAGGCAGGCAAAAGTTTTGGAACAAGCAAAATTGAGAATGATGAAGGAGAAAGGTTCTGATAAAGCAGACATGTTCTGGAACAATCTCTGGGGCAAACCAAAAGACTTAAGTTCAGGTATTGGACGTGAAATTGCAAAAGGTCTTGCAAATGTTAACCATTATGCAGAGGAGGAAATCAAAGAAAGAGCAAAGAGGGCTGCTGCTGCTGCTAGAAGATGGAGAGAATACTCAAGAAGGGGTGTTGATAAGCCTCCCACATTTAAACTTCCAGAGGCAGCTTCCAGCAAGGACTAG 1065 0.4376 MAKLLSPVYTEPLKLHNPLLNFCSRSSWRMLPKTATPMNFVTHNGKRRGCARVRVAAGEKSFSTSETVADDYYAVLGLLPDATPAQIKKAYYNCMKACHPDLSGNDPETTNFCTFINEVYGVLSDPIQRMIYDEIHGYSLTSINPFLDESSPKDHVFVDEFSCIGCKNCANVACDVFGIEEEFGRARAYSQCGKSDLVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLSGMGSASTDVFRMASSRWEKRQAKVLEQAKLRMMKEKGSDKADMFWNNLWGKPKDLSSGIGREIAKGLANVNHYAEEEIKERAKRAAAAARRWREYSRRGVDKPPTFKLPEAASSKD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01471 354 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Phco9g01471 354 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 154 184 IPR017896 -
Phco9g01471 354 Pfam 4Fe-4S single cluster domain of Ferredoxin I 158 212 - -
Phco9g01471 354 PANTHER OS01G0730500 PROTEIN 2 336 - -
Phco9g01471 354 MobiDBLite consensus disorder prediction 331 354 - -
Phco9g01471 354 SUPERFAMILY 4Fe-4S ferredoxins 155 212 - -
Phco9g01471 354 SUPERFAMILY Chaperone J-domain 71 164 IPR036869 -
Phco9g01471 354 Pfam DnaJ domain 71 133 IPR001623 -
Phco9g01471 354 SMART dnaj_3 70 128 IPR001623 -
Phco9g01471 354 PRINTS DnaJ domain signature 108 128 IPR001623 -
Phco9g01471 354 PRINTS DnaJ domain signature 73 91 IPR001623 -
Phco9g01471 354 PRINTS DnaJ domain signature 91 106 IPR001623 -
Phco9g01471 354 CDD DnaJ 71 125 IPR001623 -
Phco9g01471 354 Gene3D DnaJ domain 55 145 IPR036869 -
Phco9g01471 354 Gene3D - 154 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01471 Phco-Chr9 34293097 34298166 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01471 9 34293097 34298166 Phco9g01471 9 34293097 34298166 ECH