Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01350 ATGTTGCAGAAGGTGTGCAAGAGATACAGAATCATGGTGGGTGGAAATGGTTTGTTTTACCCCGTTGTGGGGTTTGCATCGATCGTGTTGTTCATATACATGTCTTTTGGGGACGTGAAGTTTGGTTTTGAGGAGGAAGTGGAATTGGCTTTTGTGGAGAGAAATGGAACTCAATTTATGGTGGACGGGAAGGCTTTCTATATTAATGGATGGAACTCTTACTGGTTAATGGTGCAATCTGTAGATGAGTATTCCAGGCCAAGGGTGCGTGAAATGCTGAAGGCTGGGGCCAAGATGGGGCTCACTGTGTGTAGAACTTGGGCCTTCAATGATGGTGACTACAATGCCCTTCAGAGTTCTCCTGGTGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGAAACATGGAATTAGGCTGCTCCTGAGCTTAGTAAATAACTTGCATGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGGGTAGGGCTAAGCTCATCTAACGATTCTTTCTTCTTTGATCCATCAATCCGCAGTTATTTCAAGAATTATATCAAGACAATTCTGACAAGGAAGAATACTATAACTGGACTTGAATATAGAAATGACCCTGCCATTTTTGGTTGGGAATTAATTAATGAACCTCGGTGCATGACTGATCCTTCTGGTGACACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAACTGATTGACAAGCGCCATCTTGTGACAATTGGACTTGAAGGTTTTTATGGTCCTAATGATCCGAAAAGATTGACAGTGAACCCTGAGGACTGGGCATCTCGACTTGGATCTGATTTTATAAGGAATTCCTTAATCTCAAACATTGATTTCACTTCTGTTCATATCTATCCTGATCACTGGTTTCATGAGCAAGTATCTGAAGACTACATAAAATTTGTTTCCAAGTGGATGCTTTCTCACATTGAAGATGGTGATAAGGTACTGAACAAGCCAGTTGTGTTCTCTGAATTTGGATTGTCAGACATAAATTTTACAATGCCCGAAAGAAAAACAATGTACAAAACAATTTTAGACATATCCTACAAATCTGCAAAGAAAAACAGGTCTGGAGCAGGTACTCTAGTTTGGCAATTCTTAGTTGGAGGAATGCAGGAGTTTACAGATGATTTTGGAATCATCCCTTCGGAAAAGACACCAATCCCTTCACTATTTGTGGAACAATCATGCAGATTAGCCAAGGTCAAGGGATGGTCTCATAAGGACAAAAGTTTCAAACAATTTTGTTAG 1311 0.4066 MLQKVCKRYRIMVGGNGLFYPVVGFASIVLFIYMSFGDVKFGFEEEVELAFVERNGTQFMVDGKAFYINGWNSYWLMVQSVDEYSRPRVREMLKAGAKMGLTVCRTWAFNDGDYNALQSSPGVFNEQAFKALDYVIAEARKHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYIKTILTRKNTITGLEYRNDPAIFGWELINEPRCMTDPSGDTLQDWIEEMSAFVKLIDKRHLVTIGLEGFYGPNDPKRLTVNPEDWASRLGSDFIRNSLISNIDFTSVHIYPDHWFHEQVSEDYIKFVSKWMLSHIEDGDKVLNKPVVFSEFGLSDINFTMPERKTMYKTILDISYKSAKKNRSGAGTLVWQFLVGGMQEFTDDFGIIPSEKTPIPSLFVEQSCRLAKVKGWSHKDKSFKQFC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01350 436 FunFam Mannan endo-1,4-beta-mannosidase 6 48 423 - -
Phco9g01350 436 Gene3D Glycosidases 48 423 - -
Phco9g01350 436 Pfam Cellulase (glycosyl hydrolase family 5) 84 385 IPR001547 GO:0004553|GO:0071704
Phco9g01350 436 PANTHER - 20 429 IPR045053 GO:0004553
Phco9g01350 436 SUPERFAMILY (Trans)glycosidases 51 414 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01350 Phco-Chr9 15518133 15522007 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01350 9 15518133 15522007 Phco9g01350 9 15518133 15522007 ECH