Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01319 ATGGCGGTTCGGTTCTTCCAGAACCCGATGCCCGAATTCGTACCCGAAGCGACGCCGTCTACTCCGCAGGAACAAGAAGAAGCCCTCACAGTAGGGGACTCACTCCCGAAGCTCCTGGCCATGCCCCACGCGCCACTCTCGGAGCGTCTCAAACGCGCCGCTCTAGACCTCAAAGAAACCATAGTGATAGAAACGTGGGGGGTGTCTTGGCAAAAAGATGGTGACTTTTCTCTCTACTGCGGCGTTCTGGGCACGGCTTTTCTGCTCTTGAAGTCTTACGAAGTGACACGCAACGGGAACGATCTTTCTCTTTGCTCTCAGATTGTGAAGGCTTGCGATGCCGCTTCCGTTCGTTCCAGGGATGTGACCTTTATTTGTGGGCGTGCTGGCGTGTGCTCTCTCGGGGCCGTGGCTGCAAAACACGCCGGGGATGATGAGTCCTTGAGGTACTACATGGCTCAGTTCGAAAAGATTAAGCTGTCAAAAGATCTTCCTGACGAGTTGTTATATGGGAGAGTTGGTTTTCTGTGGGCCTGTTTGTTCCTAAACAAACACCTTGGTCAGGGGACGGTTCCTTCCAGTTATACAGCTATGGTTGTTGAAGTCATTAAAAGTGGAAGGAGGTTGGGTAGGAAGGGGAGATGCCCATTGATGTTTGAATGGTATGGGGAGAAGTATTGGGGTGCTGCGCATGGATTGGCTGGGATTATGCATGTGCTGATGGATATGGAGTTGAAGCCAGATGAGCTTGAGGACGTTAAGGGAACTCTCAAATACATGATAAGCAATCGCTTTTCCAGTGGAAACTATCCCGCTAGTGAAGATGATAGGAAGAGCGACGTTCTTGTGCATTGGTGTCATGGAGCTCCAGGGATAGCCCTTACACTTGTCAAAGCAGCTAAGGTTTTTGGAGATAAAGAATTCTTGGATGCAGCTATGGAAGCAGGAGAGGTGGTTTGGAATCGTGGTCTGCTTAAGAAAGTTGGGATATGCCATGGGATAAGTGGGAATGCATATGTGTTTCTGTCACTGTACCAACTTACAGGGAATGTGAAGCATCTATACAGAGCCAAGGCTTTTGCTTGCTTTTTGCTTGACAGAGCTCATAAGCTGATATCTGGAGGTGAAATGCATGGAGGTGATAGACCATATTCATTGTTTGAAGGGCTAGGAGGCATGGCTTATCTTTTCTTGGATATGATCGATCCTTCCCTGTCTAAATTTCCAGCGTATGAACTCTGA 1242 0.4879 MAVRFFQNPMPEFVPEATPSTPQEQEEALTVGDSLPKLLAMPHAPLSERLKRAALDLKETIVIETWGVSWQKDGDFSLYCGVLGTAFLLLKSYEVTRNGNDLSLCSQIVKACDAASVRSRDVTFICGRAGVCSLGAVAAKHAGDDESLRYYMAQFEKIKLSKDLPDELLYGRVGFLWACLFLNKHLGQGTVPSSYTAMVVEVIKSGRRLGRKGRCPLMFEWYGEKYWGAAHGLAGIMHVLMDMELKPDELEDVKGTLKYMISNRFSSGNYPASEDDRKSDVLVHWCHGAPGIALTLVKAAKVFGDKEFLDAAMEAGEVVWNRGLLKKVGICHGISGNAYVFLSLYQLTGNVKHLYRAKAFACFLLDRAHKLISGGEMHGGDRPYSLFEGLGGMAYLFLDMIDPSLSKFPAYEL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01319 413 CDD euk_LANCL 78 409 - -
Phco9g01319 413 PRINTS Eukaryotic LanC-like protein family signature 215 227 IPR020464 -
Phco9g01319 413 PRINTS Eukaryotic LanC-like protein family signature 299 320 IPR020464 -
Phco9g01319 413 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Phco9g01319 413 PRINTS Eukaryotic LanC-like protein family signature 261 276 IPR020464 -
Phco9g01319 413 PRINTS Eukaryotic LanC-like protein family signature 344 362 IPR020464 -
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 226 242 IPR007822 GO:0031179
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 328 341 IPR007822 GO:0031179
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 383 400 IPR007822 GO:0031179
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 75 93 IPR007822 GO:0031179
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 166 181 IPR007822 GO:0031179
Phco9g01319 413 PRINTS LanC-like protein superfamily signature 282 302 IPR007822 GO:0031179
Phco9g01319 413 SMART LANC_like_2 72 413 IPR007822 GO:0031179
Phco9g01319 413 SUPERFAMILY LanC-like 70 413 - -
Phco9g01319 413 FunFam LanC-like protein 2 1 413 - -
Phco9g01319 413 PANTHER LANC-LIKE PROTEIN 1 413 - -
Phco9g01319 413 Gene3D - 1 413 IPR012341 GO:0005975
Phco9g01319 413 Pfam Lanthionine synthetase C-like protein 75 413 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01319 Phco-Chr9 14564605 14567051 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01319 9 14564605 14567051 Phco9g01319 9 14564605 14567051 ECH