Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01310 ATGATTTCTATCGACTCAGATGATGCAAGTTGGAAAGAGAGATGCAGCAGAAGGATGGAGGAATTGGAGAAAAGACAGTTCCAAAGTGAAGATGCAGCTTCAGAACTGCTGCATAAGGATCTTGTTGGGAAGAAAAAAGTGATGGTTTCTGAGTTGTTTAACGCTGTTGATGGAAATGGAAACGTGGATAACTTCGTTGACGCATTGCAAAGAGTGTGTGAAGAAAGGAAAGTGGGTTTGAGTGGTGTTTTTGATGAAGTTACCTGTGCTGGTGATTCACTGCTTCATGTGGCAGCGGATAAGGGGAGAGAACGGATTGTAGAGTTGATTTGTTGTCACTTTCCAGAACTTCTTATTAAGAGAAACGTGAGAGGTGATACTGCACTTCATGTTGCTGTGAGGTCCAAGAACTCAACTATAGTGAACTTCATTCTCTCCCATTATGCCATTGAGAAGACAAAACATGATGGAATGAGAGATAAAGAGATTACAAGAGAAAAGAATAAGTATGAGAATGCCCCTTTGCATGAGGCTGTGTACAGTGGGGATGTTGGTGTGGTGAAAGAGATTTTAACTGCAGATAAGGATGTGGTTCATTGTTTGAACAAGTCAAGGAGATCACCACTGTATTTGGCTGTTGTGTATGGGAATGTGGAAATTCTTAATCTTCTGTTGGAAGTTCCATTCCCTCCTCATCAACCTCTTCCACTCTGCATTGGAAACTCTCCACTTCATGCAGCCATATTGGAAAGGAATCCAGCTTTGATAGAAGAGATATTAAAGAAAAAAGCAGAGCTAGTTTATTTAAGAGATGAAAATGAAGGTACTCCCCTTCATTATGCAGCATACATTGGTTATGCTGAAGGATTTCGTATACTATTAGAAAATTCGTTTCAGAAATCAGATCAAACTGTGTTGGAAGGGAACAAGAAGGGTCATCTTCCTATTCACCTTGCTTGCAAAAGGGGTCATGTTAAGGTAGTAAAAGAATTTCTTCAACACAAATGTGTTACTAATCTTTATGTTCTCCTTAATCATAAGGGCCAGAACATTCTTCATGTTGCTGCGAAGAATGGAAAAAGTAAAGTGGTAGAATATCTGTTGGGAAATTCAAAGATTGATCAATCAACTATAAATCAGAAAGACAACAATGGAAACACTCCATTGCATTTGGCTTCAATAAGTTTATTTCCTAAAGTTCTATACCTTTTTACACAAGATGAGAGGACTGATGTGAAGCTCTCCAATAACAACGATTTAACAGCTCAAGATATCATTGGTCTGGCCATGAAAAATAAAATAACGATTCGAAAGTTTCTAGCAAGACGAGTTTTGAAAGAAGCAGGTGTGCCCTCGAAGGTAAATGATATGTTGCATTCTCAACAGCAAAAAGCAGTGAAAATGGATTTGAGCTTAAATAAACTCCTAAACACATTTTTAGTAGTGGCGACATTGATGGTGACAGTGACCTTTGCAGCTGCTTTCACTGTGCCAGGAGGTGTATACAGTTCTGATGACAGAAACCCAAAAAATAGAGGGATGGCAGTTTTGGGTGATAAAGCATTATTCTGGGTATTCACCACCTTCAACATGACATCTATGTATAGCTCTGTCATTGCATGTGGACTTCTGTTGATGGCAATGATTTTTGATCGTAAGTTGGCAACACGAGCAACTATCCTTGCGATGGGTTGCTTGGGTTTTTCCTTCTTAACAGCACCAGTGGCATTCTTGGCTGCTGTACGTCTAGTTGTGGCTAACAATTCTGCACTTGCCTATCTTATAACTGCCATAGGAGTAATGTATAGTTCCATCATCTTGTTGGGTCTACTTTTTTCATTTTTTCCAATTGGAATTCGCCTTCCCTTATTTCGTCAACTTGGCAGATTCGTTCTTCAGATTCTGATTGCATTAATAGATTATGATGATAAGCCGAGAGATTGA 1944 0.392 MISIDSDDASWKERCSRRMEELEKRQFQSEDAASELLHKDLVGKKKVMVSELFNAVDGNGNVDNFVDALQRVCEERKVGLSGVFDEVTCAGDSLLHVAADKGRERIVELICCHFPELLIKRNVRGDTALHVAVRSKNSTIVNFILSHYAIEKTKHDGMRDKEITREKNKYENAPLHEAVYSGDVGVVKEILTADKDVVHCLNKSRRSPLYLAVVYGNVEILNLLLEVPFPPHQPLPLCIGNSPLHAAILERNPALIEEILKKKAELVYLRDENEGTPLHYAAYIGYAEGFRILLENSFQKSDQTVLEGNKKGHLPIHLACKRGHVKVVKEFLQHKCVTNLYVLLNHKGQNILHVAAKNGKSKVVEYLLGNSKIDQSTINQKDNNGNTPLHLASISLFPKVLYLFTQDERTDVKLSNNNDLTAQDIIGLAMKNKITIRKFLARRVLKEAGVPSKVNDMLHSQQQKAVKMDLSLNKLLNTFLVVATLMVTVTFAAAFTVPGGVYSSDDRNPKNRGMAVLGDKALFWVFTTFNMTSMYSSVIACGLLLMAMIFDRKLATRATILAMGCLGFSFLTAPVAFLAAVRLVVANNSALAYLITAIGVMYSSIILLGLLFSFFPIGIRLPLFRQLGRFVLQILIALIDYDDKPRD 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01310 647 ProSiteProfiles Ankyrin repeat region circular profile. 124 149 - -
Phco9g01310 647 ProSiteProfiles Ankyrin repeat profile. 347 368 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 239 268 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 90 119 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 204 233 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 170 199 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 311 340 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 273 302 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 384 414 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 124 154 IPR002110 GO:0005515
Phco9g01310 647 SMART ANK_2a 347 380 IPR002110 GO:0005515
Phco9g01310 647 Pfam Ankyrin repeats (3 copies) 53 153 IPR002110 GO:0005515
Phco9g01310 647 Pfam Ankyrin repeats (3 copies) 311 374 IPR002110 GO:0005515
Phco9g01310 647 Pfam Ankyrin repeats (3 copies) 240 300 IPR002110 GO:0005515
Phco9g01310 647 SUPERFAMILY Ankyrin repeat 59 226 IPR036770 -
Phco9g01310 647 FunFam Ankyrin repeat-containing protein 308 460 - -
Phco9g01310 647 ProSiteProfiles Ankyrin repeat region circular profile. 311 334 - -
Phco9g01310 647 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 92 247 - -
Phco9g01310 647 ProSiteProfiles Ankyrin repeat profile. 124 156 IPR002110 GO:0005515
Phco9g01310 647 ProSiteProfiles Ankyrin repeat region circular profile. 347 368 - -
Phco9g01310 647 ProSiteProfiles Ankyrin repeat profile. 311 334 IPR002110 GO:0005515
Phco9g01310 647 ProSiteProfiles Ankyrin repeat profile. 204 226 IPR002110 GO:0005515
Phco9g01310 647 SUPERFAMILY Ankyrin repeat 174 425 IPR036770 -
Phco9g01310 647 Pfam Domain of unknown function 472 582 IPR026961 -
Phco9g01310 647 Gene3D - 52 472 IPR036770 -
Phco9g01310 647 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01310 Phco-Chr9 14315937 14319942 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01310 9 14315937 14319942 Phco9g01310 9 14315937 14319942 ECH