Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01266 ATGCCGCAGCACCAACCAACTATAATGGAACCTGTTCTCAGCTACAACCCCGCCAATGGCAAGACCAACCATGACTATGATGTCATAAGCTGGTTTGAAGATGTATCCCAGAATGCTGGTTATGTTCAGACTCAGTTGCTCAGCCAGATTCTGAAGCAAAACTATGGGGTGGAATATCTCAAGAAATGGTTGGGGAACTACAATATCCTTGAGATGGACGCATGTGCATTGGAATCCCTTTTCTCTTCTGTGGTTCCCCTTGCCTCACATGCTGACTTTGAGCCATTTATCCAAAGGATTGCTGATGGGGACACAGTTCCTTTACTCACTCAACAACCCATCACCACTCTTTCCTTAAGTTCTGGAACAACAGACGGAAGGCAGAAGTTCGTACCCTTTACTCGCCATAGTGCACAAACCACGCTTCAAATATTCACCCTAGCAGCAGCCTATAGATCAAGGGTTTATCCAATAAGGGAAGGGGGAAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCAAAACAAAAGGAGGTTTAACAGCCGGAACAGCCACAACACACTACTATGCAAGTGAAGAGTTCAAAATCAAGCAGCATACGACCAAGTCCTTTACTTGCAGCCCCCAAGAAGTGATTTCTGGTGGAGACTACAAACAGTCCACGTATTGCCACCTCCTTCTTGGCCTCTTCTTCTCTGACCAAGTGGAATTTATCACCTCAGCTTTTATCTACAGCATGGTGCAAGCTTTCAGCAGTTTTGAAGAACATTGGATAGAAATTTGCAATGACATCAGAGATGGCACTCTAACTTCAAGAATCAAGTCACCGAAAATGAGAAAGGCTGTTTTGGACATCATCTCTCCAAGCCCAGATTTGGCTTCAAAGTTGGAAAGTGCTTGCCATGAGCTAGAAGTGGTAGAGTGGTTTGGTTTAATTCCTAAACTCTGGCCAAATGCTAAGTATGTCTACTCCATAATGACAGGGTCCATGCAACCATATTTAAAAAAACTTAGGCATTATGCAAATGGGTTGCCTTTGGTTAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGATCCTAGTTTACCACCAGAAGATGTAACATTCGCTGTGGTTCCTACTTTCTCTTACTTTGAGTTCATACCACTTCACAGGCATGAAAAAAATTTCAGTTCAGGAGCTGATGATTTCACGGAAGATAAGCCAATTCCACTCTCTAAGATTAAAGTAGGACAAGAGTATGAAGTTGTGCTCACAACTCTCACCGGACTATACAGGTACAGGTTAGGGGATGTGGTGGAAGTGGCTGGCTTCCACAATGGGACCCCAAAGTTGAACTTTGTGTGTAGAAGAAAGCTAATTCTGACAGTAAATATAGACAAGAACACAGAAAAGGACCTTCAACTAGTGGTAGAGAGGGGGTCCCAAATTCTGACCAAAGCAAAAGCCGAGCTGGTTGATTTCACAAGCTATGCAGATGTGTCAAAGCAACCAGGGCACTACGTGATATTTTGGGAGATCAAAGGGGAGGTAGAGGACAAGATCCTTGGTGCATGTTGCACTGAAATGGACAAATTGTTCATGGATCATGGCTATGTGGTGTCAAGGAAAACCAACTCCATAGGGCCCTTGGAACTCTGCATTTTAGAGGCTGGGACTTTCAAGAAGATTTTGGACAATTTCATAGCAAATGGGGCAGCCTTGAGCCAATTCAAAACCCCCAGGTGCACCAATAATCGTGTCCTCCTTAAAATTCTTAACACGTGCACCACAAAAAGGTTTCATAGCACAGCTTACAACACTCAACAATGA 1827 0.4373 MPQHQPTIMEPVLSYNPANGKTNHDYDVISWFEDVSQNAGYVQTQLLSQILKQNYGVEYLKKWLGNYNILEMDACALESLFSSVVPLASHADFEPFIQRIADGDTVPLLTQQPITTLSLSSGTTDGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSNQFKTKGGLTAGTATTHYYASEEFKIKQHTTKSFTCSPQEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFIYSMVQAFSSFEEHWIEICNDIRDGTLTSRIKSPKMRKAVLDIISPSPDLASKLESACHELEVVEWFGLIPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFIPLHRHEKNFSSGADDFTEDKPIPLSKIKVGQEYEVVLTTLTGLYRYRLGDVVEVAGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQILTKAKAELVDFTSYADVSKQPGHYVIFWEIKGEVEDKILGACCTEMDKLFMDHGYVVSRKTNSIGPLELCILEAGTFKKILDNFIANGAALSQFKTPRCTNNRVLLKILNTCTTKRFHSTAYNTQQ 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01266 608 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 27 604 IPR004993 -
Phco9g01266 608 Pfam GH3 auxin-responsive promoter 31 585 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01266 Phco-Chr9 12902737 12906540 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01266 9 12902737 12906540 Phco9g01266 9 12902737 12906540 ECH