Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01260 ATGGCTTCCCAACACGAAGACGGGTTGAATGTCGACCCGATTCTTATTGGGGTCGATACAACAACGGCTTCGCAACACGAGAATCGGTTGGATATTGACCCGAATCCAATTGGGGTGGAGACCCAGGAAGCGGAGACGGAAAAGTTTGCGACCTTGGGTTGTGTTGCTCCTATTGAGGAAGCCGTGGAGAAGATCAATTTGTTGGGTTCCTCTCTTTCTATTGAGGAGAACGGTATTGAGGAGAACGATGATAAGGATGATAAAGGAAGTGATAGTGATAGTGACAGTGAAAGCGGAAGTGAAAATTCAGGGTCTGAAAGTCCTGATTCTGGTAGTGAAAGCAGCAGTAGCAGTAGCAGCAGTAGTAGTAGTGCTAGTGACACTAGCAGTAGTGATAGCGAAGAGGAGAGTGATGATGACAACGAGGTAGAAGTTGAGGAAGGCGAGATAAGTAGCTCCGATGAAGAAAAGATGGCTAGTTGGAGCGTGGTTGATGCTGATGGTGATCATGATGAGGAAGATGGTGACGCTGGAGTTGGACCCATCAGGTCAAAGAACGAGCTTCAGAATCTGCCCGCTGTTCCTCCTGTCAATGCTGCTTTAGAACCACACCATCAAATGTTGCCAGTGGGAATCATTACTTCTACTCTTGGTGCTCAAGTCATTGTGGAAGGAGTGGAGAAGCATGATCCTCTTAATGAGGGATCTATTCTTTGGTTGACTGAAAGCCGAAAACCACTAGGTTTAGTTGATGAAATCTTTGGACCAGTCAAGAACCCTTATTACGTTGTGAGATACAATTCTGAAAGTGAAGTTCCTACAGGGATCAACGAGGGAACCTTGATCTCGTTTGTTCCAGAATTTGCTGATCATGTGCTTAATAACCAGGATCTTTATAGGAAAGGGTACGATGCATCTGGTGCGAATGATGAAGAGTTATCTGACGAAATGGAGTTTTCAGATGATGATAAAGAGGCTGAATACAGGAGAATGCATAGAACGACAAAAAGAGGTGTAAATGATCAAAATCATGCCAAGAAAAAAAACAACAGAAAGAAATTTTCACCTAAAGAGCATGTGGCACCAACCATCCCTGATGCACCTGCTGCACCTGTGCTTAGTCACGGAAATTGTCCTCCTTTTCCTGTTATTGGACAAGCTCTTTTGGGGGGAACTGCCACAGTTCCATCATTTCCCCACTTAAACGCAGCGCCCCCCAACTTTGCTACAAATGGAATTTGGACAAACGGAACATTTCCACAGCATCCACAGAATGCCATGTTTCCTAATGGTTTTCCTGCAAATGGCCTATCATGGTTCCCACAAAACACTCAAATTCCTCCCCAGCTGCCAATGCCAGGAATTCCATTTCAACAGCAATTACATGCCAATCAGGGATCTCTTTCCACAACTATGCTACCTGGGATGCAGCCCAATATGTTTGCTCAATCCATATATGCAACAGAGCTTGTTGGTCAAAACCAAATGGCATTTGGGATGGGATCACCCTTCCCACAGATTCAGCCACCTGGACAACAGGGATTTCCATCCACTTCTGGCGCCCCCCCTCAGTTTCATCCACGTCCATCTGGTAATCGTGGTAGAAAAACATTTCATGGTGCAGGAAGGAAAGGGTGGCGACCTGCCAAGTGA 1653 0.4567 MASQHEDGLNVDPILIGVDTTTASQHENRLDIDPNPIGVETQEAETEKFATLGCVAPIEEAVEKINLLGSSLSIEENGIEENDDKDDKGSDSDSDSESGSENSGSESPDSGSESSSSSSSSSSSASDTSSSDSEEESDDDNEVEVEEGEISSSDEEKMASWSVVDADGDHDEEDGDAGVGPIRSKNELQNLPAVPPVNAALEPHHQMLPVGIITSTLGAQVIVEGVEKHDPLNEGSILWLTESRKPLGLVDEIFGPVKNPYYVVRYNSESEVPTGINEGTLISFVPEFADHVLNNQDLYRKGYDASGANDEELSDEMEFSDDDKEAEYRRMHRTTKRGVNDQNHAKKKNNRKKFSPKEHVAPTIPDAPAAPVLSHGNCPPFPVIGQALLGGTATVPSFPHLNAAPPNFATNGIWTNGTFPQHPQNAMFPNGFPANGLSWFPQNTQIPPQLPMPGIPFQQQLHANQGSLSTTMLPGMQPNMFAQSIYATELVGQNQMAFGMGSPFPQIQPPGQQGFPSTSGAPPQFHPRPSGNRGRKTFHGAGRKGWRPAK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01260 550 MobiDBLite consensus disorder prediction 506 520 - -
Phco9g01260 550 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 179 285 - -
Phco9g01260 550 Gene3D Probable tRNA pseudouridine synthase domain 179 285 IPR038664 -
Phco9g01260 550 MobiDBLite consensus disorder prediction 333 368 - -
Phco9g01260 550 MobiDBLite consensus disorder prediction 96 130 - -
Phco9g01260 550 Pfam Gar1/Naf1 RNA binding region 209 289 IPR007504 GO:0001522|GO:0042254
Phco9g01260 550 SUPERFAMILY Translation proteins 207 270 IPR009000 -
Phco9g01260 550 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 37 523 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Phco9g01260 550 MobiDBLite consensus disorder prediction 71 159 - -
Phco9g01260 550 MobiDBLite consensus disorder prediction 131 151 - -
Phco9g01260 550 MobiDBLite consensus disorder prediction 503 550 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01260 9 12696355 12698804 Phco9g01260 9 12696355 12698804 ECH