Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01247 ATGACGGTTGCTTCCTTCTTCAAGAGGGCCTCCAGGGTTCTCAGCTCCTCCAATTTTCTGCTGCTCTGCACTCTCAGTGGTGGTGGTGTGGTGGCATACTCAGAATCACAAACAGGAGCTGAACGTCCTAGTATTGATGGTAGTGGGCCCTCCAAGAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGATGCTTCATTATACGATGTTCAGGTTGTTTCACCTCGTAATTACTTTGCATTTACTCCCTTATTACCTAGTGTCACTTGTGGTACAGTTGAAGCACGGAGCATTGTAGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAATAAACTTTTGGGAAGCAGAATGTGTCAAGATTGATTCTTCAAACAAAAAGGTTTTCTGTCGGTCCAATATTGACAACTTGGTGGGAAGTGGCGAATTTTCTTTGGACTATGACTTCTTGGTTGTAGCGGTAGGAGCACAAGTAAATACATTTAACACCCCTGGTGTCAAGGAGAACTGTCATTTTCTGAAGGATGTGGAGGATGCTCAGAAGATTAGACTGTCTGTGATTGATTGCTTTGAGAAAGCTGTTCTTCCTAGTATAACTGATGAAGAGCGAAGGTCAATTCTTCATTTTGTAGTAGTGGGAGGAGGTCCAACTGGTGTAGAATTTGCTGCAGAACTGCATGATTATGTCCTAGAAGATTTAATCAAATTATATCCCACTGCTAAAGATAAAGTGAAAATAACACTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGCAAAAATTTACAAGAGATGGGATAGAAGTTGAAACAGGATGCCGGGTTGTTGGTGTTAACGACAAGGTAATTACAATGAAGGCAAAATCAACAGGAGACATTTGCTCGGTGCCCCATGGATTGGTTGTCTGGTCAACTGGCATTTCAACTCTTCCAGTTATAAGGGACTTCATGAAAGAAATTGGTCAGGCTGAAAGGCATGTACTAGCAACTAATGAGTGGTTGCGTGTGAAGGGATGTGAAGAGGTGTATGCCATTGGTGATTGTTCTAGCATAACTCAACGTAAAATCATGGATGATATCACAGCCATATTTGAGGCTGCAGACAAAAATAAGTCAGGCACCTTAACTATTGAAGAATTCCAGGAGGTGATGGATGACATTATATTAAGATATCCACAAGTTGAACATTATCTAAAGCAGAAACATCTGCGTGATTTTAGCACTCTGTGGAAAGATTTGCAAGGGAATGAAAGCAAGGAAATAGACGTTGAAGCATTTAAGCTGGCACTTTCTCATGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGATGCTTTAACCATAGGGATCACGCTGAAGAGCATCCTGAAGGTCCTCGACGATTTAGCGGATCTGGACACCATAAGTTTGTTCCCTTCCGGTATAAGCATTTTGGTCAATTTGCTCCACTGGGTGGAGAGCAGGCAGCTGCAGAACTACCTGGAGATTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGAACAAGGGTCTTGGTCATGTCTGATTGGACAAGAAGATTCATATTTGGCAGGGATTCAAGTGGAGTTTAA 1722 0.4268 MTVASFFKRASRVLSSSNFLLLCTLSGGGVVAYSESQTGAERPSIDGSGPSKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEINFWEAECVKIDSSNKKVFCRSNIDNLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSITDEERRSILHFVVVGGGPTGVEFAAELHDYVLEDLIKLYPTAKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVETGCRVVGVNDKVITMKAKSTGDICSVPHGLVVWSTGISTLPVIRDFMKEIGQAERHVLATNEWLRVKGCEEVYAIGDCSSITQRKIMDDITAIFEAADKNKSGTLTIEEFQEVMDDIILRYPQVEHYLKQKHLRDFSTLWKDLQGNESKEIDVEAFKLALSHADSQVKSLPATAQVAAQQGAYLARCFNHRDHAEEHPEGPRRFSGSGHHKFVPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSGV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01247 573 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 403 - -
Phco9g01247 573 SUPERFAMILY FAD/NAD(P)-binding domain 218 372 IPR036188 -
Phco9g01247 573 SUPERFAMILY FAD/NAD(P)-binding domain 52 270 IPR036188 -
Phco9g01247 573 Gene3D - 435 572 - -
Phco9g01247 573 Gene3D - 43 431 - -
Phco9g01247 573 PANTHER NADH DEHYDROGENASE 49 571 IPR045024 GO:0003954|GO:0006116
Phco9g01247 573 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Phco9g01247 573 SUPERFAMILY EF-hand 367 457 IPR011992 -
Phco9g01247 573 SMART efh_1 378 406 IPR002048 GO:0005509
Phco9g01247 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 379 IPR023753 GO:0016491
Phco9g01247 573 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Phco9g01247 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 23 42 - -
Phco9g01247 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Phco9g01247 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01247 Phco-Chr9 12541696 12552278 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01247 9 12541696 12552278 Phco9g01247 9 12541696 12552278 ECH