Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01204 ATGGAAACAAGATCTGCAAAACGGAAGAAAATGGCTCAAATTGTAGCGAACGATGCCAAAGCAGCCACGGATCGGATCAGTGATCTCCCTGATGCAGTTCTTCATCATATCCTTTTCTTACTTCCCATAAAATGTGTTGCACAAATGAGCATTCTTTCCAAACGATGGAGACATTTATGGTGCACTTTTCCTGACCTTGATTTCAGAACCCTTGACCCGTTTCAAATCTCTTCCAAAAATGTTAAATTTTTGGAGTTTGCAAAGCCAAGGCAACCTTTGGATTTGTCACGGATGGATTTCATCTCACAAGTTCTCTCCATGCGTGACAAACACTCAGACATTAGGGTTCTTTGTTTTCGTGCACGTTTGAGTTTTTCACGGTTAAATGGTTTGATTCGTAGGGCTATTAGGCATAACGTTAGAGAGCTTGATATTGAAGCGTCAACAGTGTGTACAGATGATTACTTCAACTTTCCTAGATGTGTTATTGGGAGTGAATCTTTAAGGGTTTTGAAACTAAAATCAGGTTTTCGATTGCCTCCATCATCAGTTATGAGGCATGGCTTTCAATCTCTTCAAACCTTGTCTCTTTCGCTAGTTATTTTGAACAACCAACCTTCTCTCACTGATTTGTTCTCTGGATCATCCTTTCCTCTTCTTAAAACTCTCAACCTTGATGCATGCTTCGGGTTAAAATATCTTCATGTTGGATGTAGGGCTCTAGAAGATTTGAACTTAGAGAAATGTTATGAGCTAGAGGGTTTGGACATCTCATGTGCAAAACTTGAGAGAATGAGATTGGTGAGATGTTTTGATGCCTGTAGTGACAAGAGTTGGGTAAAAATCAATGCACCCCAGCTTGAGCATTTGTGTTGGCAGCATAATGCTGTCACTGACATGGCTATGTTTGAGCCTTCGACTTTGTTGCATGAGGTCACAGTTGGTTTCTATATATTGACCAGAGATAATAGTCGGAGTAAGCTTCAAAGTGCTGTTGATCTATTATCTGGGCTATCTCGTGTGCATTCCTTGTCTCTTGAAAGGCAAACTATTGAGATTCTATCAAATAATCACCTCCTTTTTCAGCCCTTTTATGATCTGAAACATTTACAACTGCAAACTGGTTTCAACAAAAGCAATGTTCCGGGATTGACATGTCTATTCAAGAGCTCTCCCACTCTCAACACTTTGATTCTGAAGATCATTCACGAATATAGGATTGAAAGAAAAGAATGGAATAGAGACTTGTGGGACATGACTATCAGTGAGGGAGAGCAGTATTGGGAATCTCAGATCAGAACTCTGGAGTCTTTTCTACAACACTTGAAAGTGGTCAAAATTCACGGATTTCTTGATTATGAGAATGAAGTTGCACTTGCAAAGTTTCTCCTTAAGCATGGAAAAGCCTTGGAAGAAATGGTATTACACACAGGACATTGCAACGCAAGAGACACTCTTAGACGACAAAAAATAAGGTCACAAATGATGGGGTTTTCTTGGGCTTCTTCTAATGCAAAAGTGGCATTTCAGTAG 1533 0.3979 METRSAKRKKMAQIVANDAKAATDRISDLPDAVLHHILFLLPIKCVAQMSILSKRWRHLWCTFPDLDFRTLDPFQISSKNVKFLEFAKPRQPLDLSRMDFISQVLSMRDKHSDIRVLCFRARLSFSRLNGLIRRAIRHNVRELDIEASTVCTDDYFNFPRCVIGSESLRVLKLKSGFRLPPSSVMRHGFQSLQTLSLSLVILNNQPSLTDLFSGSSFPLLKTLNLDACFGLKYLHVGCRALEDLNLEKCYELEGLDISCAKLERMRLVRCFDACSDKSWVKINAPQLEHLCWQHNAVTDMAMFEPSTLLHEVTVGFYILTRDNSRSKLQSAVDLLSGLSRVHSLSLERQTIEILSNNHLLFQPFYDLKHLQLQTGFNKSNVPGLTCLFKSSPTLNTLILKIIHEYRIERKEWNRDLWDMTISEGEQYWESQIRTLESFLQHLKVVKIHGFLDYENEVALAKFLLKHGKALEEMVLHTGHCNARDTLRRQKIRSQMMGFSWASSNAKVAFQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01204 510 SUPERFAMILY F-box domain 23 69 IPR036047 GO:0005515
Phco9g01204 510 Gene3D Ribonuclease Inhibitor 64 485 IPR032675 -
Phco9g01204 510 SMART 9598neu4hmm 436 510 IPR006566 -
Phco9g01204 510 SUPERFAMILY RNI-like 93 405 - -
Phco9g01204 510 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 24 484 - -
Phco9g01204 510 Pfam F-box domain 26 62 IPR001810 GO:0005515
Phco9g01204 510 Gene3D - 10 63 - -
Phco9g01204 510 ProSiteProfiles F-box domain profile. 23 71 IPR001810 GO:0005515
Phco9g01204 510 Pfam FBD 436 475 IPR006566 -
Phco9g01204 510 CDD F-box_AtFBL13-like 26 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01204 Phco-Chr9 11635089 11638727 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01204 9 11635089 11638727 Phco9g01204 9 11635089 11638727 ECH