Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01165 ATGTCCCAGTTAGGCCGGAGACTCGACAACTCCTCCACCTTAAGGCGACGCTTTCACCACCGCGTTTCCCTGCTACGGCGCTGCATCCTCCGCGTCCTCCACCGCATCCTGCTCTGCTCCGGGAGGAAGCCTAACAGCACCTACAGCATGCTGACGCCAGCATTACCCTCTACGTCTCCGCCGCTAGTGGGAACCTCCGGCGAGATTGGTCGTGAAGAGATGGATGTCGCGCCGCCGGCGCTGTTTCAAACCCATGACTTGGATTCTGATTTGGTCTCCTTGAAGATCAGCTTGTTGGGAGATTGCCGAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGAAAAGCAGAAGCAAGGTAGCCCAATAGAAGGGTTAAATCAGATGGACAAAACATTGGTCGTTAAAGGGGCTCGTATCTCATACTGTATCTGGGAAGTACAAGGTGATGGAAAAACAGAAGATCAAATTCCGATGGCTTGTACGGATTCTGTGGCGATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTCCTTGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACGGCAATACCAGTGTTGATAGGAACCAAGTTTGATGATTTTATCCAGCTCCCTATTGATATACAATGGACCATTGCTAATGAGGCAAGAACATATGCAAAGGCCCTGAATGCCGCCTTGTTCTTTTCCAGTGCAACCTACAACATCAACGTAAATAAGATCTTCAAGTTCATCACTGCTAAACTTTTTGACCTGCCATGGACAATGGAAAGGAATTTGAATGTTGGGGAGCCCATCATTGACTTCTAA 837 0.4731 MSQLGRRLDNSSTLRRRFHHRVSLLRRCILRVLHRILLCSGRKPNSTYSMLTPALPSTSPPLVGTSGEIGREEMDVAPPALFQTHDLDSDLVSLKISLLGDCRIGKTSFLVKYVGDEKQKQGSPIEGLNQMDKTLVVKGARISYCIWEVQGDGKTEDQIPMACTDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDIQWTIANEARTYAKALNAALFFSSATYNINVNKIFKFITAKLFDLPWTMERNLNVGEPIIDF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01165 278 Pfam Ras family 95 258 IPR001806 GO:0003924|GO:0005525
Phco9g01165 278 FunFam Septum-promoting GTP-binding protein 1 84 268 - -
Phco9g01165 278 SMART rab_sub_5 94 261 - -
Phco9g01165 278 SMART rho_sub_3 96 260 IPR001806 GO:0003924|GO:0005525
Phco9g01165 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 272 IPR027417 -
Phco9g01165 278 ProSiteProfiles small GTPase Rab1 family profile. 88 278 - -
Phco9g01165 278 PANTHER - 91 268 - -
Phco9g01165 278 Gene3D - 86 270 IPR027417 -
Phco9g01165 278 PRINTS Transforming protein P21 ras signature 94 115 - -
Phco9g01165 278 PRINTS Transforming protein P21 ras signature 135 157 - -
Phco9g01165 278 PRINTS Transforming protein P21 ras signature 196 209 - -
Phco9g01165 278 PRINTS Transforming protein P21 ras signature 236 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01165 Phco-Chr9 10967559 10969768 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01165 9 10967559 10969768 Phco9g01165 9 10967559 10969768 ECH