Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01123 ATGGCCAACCAAAACCCTTCCCCCCTCTATGAGAAACACTGGTACAAGCACACTTATAAAAGGGTAACGGAGAGTTTGCTCTTAATCCTTCTCCTGTTGCTGCTTGGCTACCGCGTTATCTCTGTCAACAACTACTCTTTCCCTTGGTTTGTTGCTTTTGTCTGCGAGTCATGGTTCACCATCTCTTGGTTTTTCACCCTCGCCACTCAGTGGAGTCCAGCAGTAATCAAAACCTACCCAGAACGTCTCTTACAAAGTGTGCAGGATCTTCCACCAGTGGATTTGTTTGTGACAACAGCAGACTCTGTCCTTGAACCACCCATTATCACTGTGAACACTGTGTTGTCTCTGTTGGCACTTGATTACCCACCTCACAAGCTTGCTTGTTATGTTTCTGACGATGGTTGTTCCCCCCTAACCTTCTACGCTCTTCAAGAAGCCTCAAAATTTGCAAAGTTTTGGGTACCATTCTGTAAGAAATACGATGTGCAAATTAGAGCTCCATTTAGATACTTCTCTGACAAACTTGAGGTCTCCACGTCCAACAACACACCACAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGATGACCTTAGCAGAAAAATAGAATTGGAAGCATCCCAAAAATCAAATCCAAGTAATGGAGACTTTGCTGTTTTCTCAAACACTGAGAAGACAAATCATCCATCCATAATCAAGGTTATATGGGAGAACAAAGAAGAGCTTGAAGATGGGTTACCGCATTTGATCTATATATCTAGAGAGAAGAGGCCAAAACATTCTCATCATTTCAAAGCTGGTGCCATGAATGTTTTGGCAAGAGTCTCGGGGTTGATAACCAATGCTCCCTTTTTGCTGAACGTGGACTGTGACATGATTGTAAATAATCCAAAGATTGTTCATCATGCGTTGTGCATTTTACTTGATCCCAAAGGCCAGAAAGAAGTTGCATTTGCTCAATTTCCCCAACAATTCTATGCTACATTAAAGGACGACCCTTTTGGAAACCAGATGGCAATTTTGATTAAGTACTTTGCAACTGGATTAGCTGGACTGCAAGGGCCTTTCTACGCTGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATTACGTTGACAAGGGAAACAGCATATCAGAGGAGGAATTAAAACAAAAATTTGGAGCTTCAAAGGAGATTATGAAGTCAGCTGGTTGTGGTTTGGAAGGAAGAAGATATTCCGCAAATGCTATTAATATTGGTCAAGTTATTGACTTAGCAAGCCAAGTTGCTGGTTGTGGATATGAATATGGCACAGGATGGGGCAAACAGGTGGGTTGGATATATGGATCACTAACAGAGGATGTGCTGACTGGACTGACTATACATGAAAAAGGTTGGAGATCAGAATGGTGTACACCAAGCCCCATTGCCTTCACAGGCTTTGCTCCAGGAGGTGGCCCAACTACAATGGCCCAACAGAAGAGATGGGCCACAGGGTTGCTGGAGATCTTTTTAAGCAAGCACTGTCCTATATTTGCCACCCTTTTTCATAAGCTTACTTTCAGGCAGTGCATAGCATATATGTGGGTTATCAATTGGGGGCTGCGACCATTCTTTGAAGTATGTTATGCGTCTCTTCTTGCACACTGCATCATCACCAACTCCAATTTCTTGCCACAGGACCTTGGCATATGTATTCCCGTTGCTTTTCTTGTAATTTACAAGGTATACACTGTATCAGTATATTTAGCAGAAGGGCTATCAATTAAAGCATGGTGGAATAATCAAAGGATGTCAAGAATAACACCCATGAATGCTGGTTTTTGTGCTTTTCTCAGTGTCCTACTTAAGAAATTAAGAATATCTGAAACTGTATTTGACGTAACAAAGAAAGATTTACCCCCAACAGATGATGTTGGAGATGACAAAGATGCTGCCAGGTACACCTTCGATGAATCCCTAGTTTTCTTGCCAGGCACTACCATTTTATTGTTGCAGTTGACAGCAATAATGATCAAGTTATTAGGAATGCAAGCAGTGGTGGCAAATGAAAGCAAGAAGGAGTGTGGAATTGGTGAGATTTTTTGTAGTGTTTATTTGATAATTTGTTATTGGCCATTTCTAAAGGGATTATTTGAGACAGGAAAGTATAGGATCCCCATGTCTACAATATACAAATCAACTATCTTAACATCTCTCTTTGTACACCTATCTAGAAACACTGTTGCTACTTGA 2241 0.4101 MANQNPSPLYEKHWYKHTYKRVTESLLLILLLLLLGYRVISVNNYSFPWFVAFVCESWFTISWFFTLATQWSPAVIKTYPERLLQSVQDLPPVDLFVTTADSVLEPPIITVNTVLSLLALDYPPHKLACYVSDDGCSPLTFYALQEASKFAKFWVPFCKKYDVQIRAPFRYFSDKLEVSTSNNTPQFKQEWLQMKDMYDDLSRKIELEASQKSNPSNGDFAVFSNTEKTNHPSIIKVIWENKEELEDGLPHLIYISREKRPKHSHHFKAGAMNVLARVSGLITNAPFLLNVDCDMIVNNPKIVHHALCILLDPKGQKEVAFAQFPQQFYATLKDDPFGNQMAILIKYFATGLAGLQGPFYAGTNCFHRRKVIYGLSPDYVDKGNSISEEELKQKFGASKEIMKSAGCGLEGRRYSANAINIGQVIDLASQVAGCGYEYGTGWGKQVGWIYGSLTEDVLTGLTIHEKGWRSEWCTPSPIAFTGFAPGGGPTTMAQQKRWATGLLEIFLSKHCPIFATLFHKLTFRQCIAYMWVINWGLRPFFEVCYASLLAHCIITNSNFLPQDLGICIPVAFLVIYKVYTVSVYLAEGLSIKAWWNNQRMSRITPMNAGFCAFLSVLLKKLRISETVFDVTKKDLPPTDDVGDDKDAARYTFDESLVFLPGTTILLLQLTAIMIKLLGMQAVVANESKKECGIGEIFCSVYLIICYWPFLKGLFETGKYRIPMSTIYKSTILTSLFVHLSRNTVAT 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01123 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 377 IPR029044 -
Phco9g01123 746 Pfam Cellulose synthase 93 382 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phco9g01123 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 535 IPR029044 -
Phco9g01123 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 731 - -
Phco9g01123 746 FunFam Cellulose synthase-like protein H1 222 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01123 Phco-Chr9 10342305 10358067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01123 9 10342305 10358067 Phco9g01123 9 10342305 10358067 ECH
Phco9g01123 9 10342305 10358067 Phco10g01336 10 35852670 35860725 PCT