Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01105 ATGGGAAAGAAGAACGAGAACCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAAGCAGCACAATCAGATGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAAAAAGAAGGTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCATCATCGAACAATCCCTCGAATCTCTCCCCGAACATGCCGCCGCCTCCACCACCATCATCAGCCTGGACCCTGCCGAAATGACGCCTGAAGAAACGAGGAAGCAGGAGGAGGCGCTCCACGCCAGCAGCCTCCGAGTTCCGCGCCGGCCTCCGTGGACTCCCGACATGTCTCCCGAGGAGCTTCATGACAGAGAAACGCAAGCTTTCTTGGTTTGGCGTCGCAGTTTAGCGAGGCTTGAGGAGAATAAGAAGCTTGTCCTTACTCCGTTTGAGAAAAATATTGACATCTGGAGACAGCTCTGGCGTGTGGTTGAGCGTAGTGATCTGCTTGTTATGGTTGTTGATTCACGAGATCCTCTGTTTTATCGTTGTCCAGACCTGGAGGATTATGCACGGGAGGTTGATGAACATAAACGTACATTGCTTCTTGTTAATAAGGCAGATCTTTTGCCAACTTCTATGAGAGAGAAATGGGCAGAGTATTTTCGAGCTCATGATATTCTCTTCATCTTCTGGTCCGCTAAAGCTGCTACAGCAGCCCTGGAAGGAAAAAAGCTTGGTTCATCATGGGATGATGATAACACGGGGAGAACTAATAGCCCAGACACAGACACAAAGATATATGGAAGGGACGAGCTATTGGCCCGCCTGCAATCAGAAGCAGAAGAGATAGTGAACAGGAGGAGGAATTCAGGCACCTCTGATGCAGGGTCATCTAACATTAAATCTCCTGCTGAAAATACTGCTGGCAGTTCACCATCGAGTAATGTAGTTGTGGGATTTGTTGGATATCCTAATGTGGGTAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGGACTGGTGTCACCTCCACCCCCGGTAAAACAAAGCACTTTCAGACATTAATTATCTCTGATAAGCTGACCCTCTGCGATTGTCCTGGATTAGTTTTTCCATCTTTCTCTAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTGCCCATTGATAGGATGACTGAACACCGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGAGATGTCATCGAACAGATTTACAAGATAAGGCTTCCTAAACCTAAGCCATATGAGTCCCAATCCCGTCCTCCTCTAGCATCTGAACTTTTAAGAGCATACTGTGCTTCCCGTGGGTATGTTGGTTCTAGTGGACTCCCTGATGAAACTAGGGCCACCCGTCAGATATTGAAAGATTACATTGATGGAAAGCTGCCTCACTATGAAATGCCTCCAGGTTCATCAGAAGAGGAACAAGCTTTGGAAGATCCCACCAGACATGACTCGGTTGACTTGCATGCATCAGATTCGTCTGATGTTGACGATTCTTCAGATGTTGAGAGTGGTGTTGCACCAAATCTTGAGCATGTATTGGATGACCTCAATTCATTTGACATGGCCAATGGACTTGCGCCAAAAAGTACAACTCTTAAGAAGCCCAAGGAATCTCATAAACACCATAAAAAGCCACAGAGGAGAAAAGATCGTACCTGGAGAGCAGGAAACACTGATGCTGATGGGATGCCGATTGCAAGATTCTTTCAGAAACCAGCTAATACAGGTTCTCTGAAGGATTGA 1755 0.4689 MGKKNENQKTGLGRALVKQHNQMIQQSKDKSRFYKKKVLESFTEVSDIDAIIEQSLESLPEHAAASTTIISLDPAEMTPEETRKQEEALHASSLRVPRRPPWTPDMSPEELHDRETQAFLVWRRSLARLEENKKLVLTPFEKNIDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEDYAREVDEHKRTLLLVNKADLLPTSMREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWDDDNTGRTNSPDTDTKIYGRDELLARLQSEAEEIVNRRRNSGTSDAGSSNIKSPAENTAGSSPSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVPRDVIEQIYKIRLPKPKPYESQSRPPLASELLRAYCASRGYVGSSGLPDETRATRQILKDYIDGKLPHYEMPPGSSEEEQALEDPTRHDSVDLHASDSSDVDDSSDVESGVAPNLEHVLDDLNSFDMANGLAPKSTTLKKPKESHKHHKKPQRRKDRTWRAGNTDADGMPIARFFQKPANTGSLKD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01105 584 MobiDBLite consensus disorder prediction 462 507 - -
Phco9g01105 584 FunFam Large subunit GTPase 1 369 470 - -
Phco9g01105 584 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 147 364 IPR030378 GO:0005525
Phco9g01105 584 MobiDBLite consensus disorder prediction 1 29 - -
Phco9g01105 584 MobiDBLite consensus disorder prediction 524 568 - -
Phco9g01105 584 FunFam Large subunit GTPase 1 146 365 - -
Phco9g01105 584 CDD HSR1_MMR1 146 364 - -
Phco9g01105 584 PRINTS GTP1/OBG GTP-binding protein family signature 309 329 IPR006073 GO:0005525
Phco9g01105 584 PRINTS GTP1/OBG GTP-binding protein family signature 355 370 IPR006073 GO:0005525
Phco9g01105 584 MobiDBLite consensus disorder prediction 276 304 - -
Phco9g01105 584 MobiDBLite consensus disorder prediction 237 256 - -
Phco9g01105 584 Gene3D - 368 470 IPR023179 -
Phco9g01105 584 Pfam 50S ribosome-binding GTPase 309 365 IPR006073 GO:0005525
Phco9g01105 584 MobiDBLite consensus disorder prediction 89 109 - -
Phco9g01105 584 MobiDBLite consensus disorder prediction 538 554 - -
Phco9g01105 584 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 558 IPR043358 GO:0003924
Phco9g01105 584 MobiDBLite consensus disorder prediction 280 304 - -
Phco9g01105 584 Gene3D - 146 365 IPR027417 -
Phco9g01105 584 MobiDBLite consensus disorder prediction 478 499 - -
Phco9g01105 584 MobiDBLite consensus disorder prediction 12 28 - -
Phco9g01105 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01105 Phco-Chr9 10083285 10086609 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01105 9 10083285 10086609 Phco9g01105 9 10083285 10086609 ECH