Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01071 ATGGCACATGTTTCTGTTGTCTCAGCTGCTGTTAAAAGGCTTGAGGGGAAAGTGGCCATTATCACTGGTGGTGCCAGCGGTATTGGTGCGGCCACTGCTAGACTCTTCTCTGAGCATGGAGCTCATGTGGTGATAGCTGATATTCAAGACGATTTGGGTCTTTCTGTTTGCAATGAATTGAAATCTGCTGTGTATGTTCATTGTGATGTGACAAAGGAAGAAGACGTTGAAAAGTGCGTGAACGTAACAGTTTCCAAGTATGGGAAGCTGGATATCATGCTTAATAACGCTGGTACATGCCATGAGCTCAAAGATAGCATAGTGGACAACATCACGTCTGAGTTTGAGAGAGTGATCAGTGTGAACGTGGTTGGTCCATTTCTGGGAACAAAGCACGCAGCAAGGGTAATGATTCCTGCTAAAAGGGGTTGCATAATTAACACATCTAGTATTGCTGGATGCAGGGGTACAGGGTCTCCACATGCGTACGTCGTCTCAAAGCATGGACTAGAGGGACTGACGAAAAACACAGCGGTGGAGCTTGGACAATTCGGTATTCGGGTGAACTGTGTGTCTCCTTATTTGGTTGCCACACCGATGTTGAAGAAGTATTTCAATCTTGATGAAGAAGGAGTTCGTAAGGCTTATTCCAACCTAAAAGGTTCTTATCTAGTGCCCAACGATGTGGCCGAAGCTGCTCTTTTCTTGGCAGGTGATGAGTCTAATTATGTTAGTGGTCACAGTCTTCTGTTAGATGGAGGCTACACCATTACAAATGCAGGCTTTTCTCCAAATGCAGGCTTTTCTCCTGGCCAGTCTGAGTAA 825 0.4545 MAHVSVVSAAVKRLEGKVAIITGGASGIGAATARLFSEHGAHVVIADIQDDLGLSVCNELKSAVYVHCDVTKEEDVEKCVNVTVSKYGKLDIMLNNAGTCHELKDSIVDNITSEFERVISVNVVGPFLGTKHAARVMIPAKRGCIINTSSIAGCRGTGSPHAYVVSKHGLEGLTKNTAVELGQFGIRVNCVSPYLVATPMLKKYFNLDEEGVRKAYSNLKGSYLVPNDVAEAALFLAGDESNYVSGHSLLLDGGYTITNAGFSPNAGFSPGQSE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01071 274 FunFam Short-chain dehydrogenase reductase 3 261 - -
Phco9g01071 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 257 IPR036291 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Phco9g01071 274 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Phco9g01071 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Phco9g01071 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Phco9g01071 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Phco9g01071 274 Pfam Enoyl-(Acyl carrier protein) reductase 23 256 - -
Phco9g01071 274 Gene3D - 3 268 - -
Phco9g01071 274 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 11 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01071 Phco-Chr9 9471122 9472046 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01071 9 9471122 9472046 Phco9g01071 9 9471122 9472046 ECH