Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01066 ATGTCTTCGTCCCTCAGCCATGCGATCACGGGTCTACCAGGTCTTTCTCTCAGCAAGGAGTTGGAATCAGCTTCCTACATCCATTGCGATGTGACAAACAAAAACCACGTTGAGAACGCTGTTAACACAGTGGTTTCCAAACATGGCAAACTAGATACCATGTTCAACAACGCCGGCATAATTGGGCCGAACAAAACCTGCATACTGGACAACACGAAGTCCGAATTTGAGGCAGTGATTAACGTTAACCTAGTTGGTGTTTTTCTTGGAATAAAGCACGCTGCAAGGGTTATGATTCCTGCGCGAAGAGGAAGCATAGTTAACACTGCTAGTGTTTGCGGAAGCATAGGTGGCGTGGCCTCACACGCGTACACAACTTCCAAACACGGAGTGGTGGGACTGACGAGAAACACTGCGGTGGAACTTGGAGCATTCGGGGTGAGGGTGAATTGCGTATCACCCTACGTGGTTGCCACGCCCTTGGCTAAGAACTTTTTTAAGCTTGACGACAAGGGGGTTCACGGAGTGTACTCAAACCTAAAGGGTGCTGTTCTTGAGCCAAAAGATGTGGCCGAAGCTGCTCTTTATTTAGCCAGTGATGAGTCCAAGTATGTTAGTGGTCACAATCTTGTGGTAGATGGAGCCTTCACTGTCGTCAACAGTGGCTTTTGTGTCTTTGGACAGTCTTCCTGA 693 0.4834 MSSSLSHAITGLPGLSLSKELESASYIHCDVTNKNHVENAVNTVVSKHGKLDTMFNNAGIIGPNKTCILDNTKSEFEAVINVNLVGVFLGIKHAARVMIPARRGSIVNTASVCGSIGGVASHAYTTSKHGVVGLTRNTAVELGAFGVRVNCVSPYVVATPLAKNFFKLDDKGVHGVYSNLKGAVLEPKDVAEAALYLASDESKYVSGHNLVVDGAFTVVNSGFCVFGQSS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01066 230 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 112 IPR002347 -
Phco9g01066 230 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 49 60 IPR002347 -
Phco9g01066 230 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 143 IPR002347 -
Phco9g01066 230 Pfam Enoyl-(Acyl carrier protein) reductase 17 216 - -
Phco9g01066 230 PRINTS Glucose/ribitol dehydrogenase family signature 124 143 IPR002347 -
Phco9g01066 230 PRINTS Glucose/ribitol dehydrogenase family signature 98 114 IPR002347 -
Phco9g01066 230 PRINTS Glucose/ribitol dehydrogenase family signature 180 200 IPR002347 -
Phco9g01066 230 PRINTS Glucose/ribitol dehydrogenase family signature 145 162 IPR002347 -
Phco9g01066 230 PRINTS Glucose/ribitol dehydrogenase family signature 49 60 IPR002347 -
Phco9g01066 230 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 111 139 IPR020904 GO:0016491
Phco9g01066 230 FunFam Short-chain dehydrogenase reductase 12 221 - -
Phco9g01066 230 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 218 IPR036291 -
Phco9g01066 230 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 14 220 - -
Phco9g01066 230 Gene3D - 6 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01066 Phco-Chr9 9208760 9209550 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01066 9 9208760 9209550 Phco9g01066 9 9208760 9209550 ECH