Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01055 ATGACTATGGCGCCTCGCAAACCTCGCGAGCGTGAAATGCTGTTCGACTCCGTCATCGCGCTCGTCTTCATCCTCGTCGCCTGCGTCGACCTCTGCGACGGTGCCACCGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGACTCGCCAGCCTCAACCATCACGCCGCCTCGCTCCACTTCTCTCCACACGCTGATCTCTCTCGCACCGTCCTCCTCATACCTCTTCGCGAACTTAACATGTCTTTTGTTCAAGAATATATTGCAGAAAGCAAGCCTCTTGGGGGTTTAATATTTTTGCTTCCCCGGATGTTCAGTTTTGAAAACAAAGATGGTATGGGAAATAACCATCGTGATGGGCCGCTGAAGAATATACTGGTGGAACTTGAACAAATACTCATACACTCCAACTTACCTTATCCTGTTTATTTTGCATTTGAGGATGACAATATTGATGCTGTGTTAGCTGATATCAAGAAGAATGATGTCACTGGTCAACCTGCTACTGCAACAACTGGCGGATACAAATTTGTTGTTTCAGCCGCAGAACCAAGGAAAGTTGTTTCTCCACCCATTACAAATATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATGATGCTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCCGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGCATTGTGGCTCTGCTTGAAGTAGCTAGGCTGTTTTCTCTCTTGTATTCTAATCCAAAGACAAGAGGACAATACAATCTGCTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGATCAACGTATGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCTTGGGAAAATGAATTGTGGATTCATGTGTCTAAGCCCCCAGAAAATGCCTTCATTAAGAAAATTGTGGAAGATTTTTCAAGTGTTGCAGAAGAATTAGGCTTTAAAGTGAATTTGAAGCACAAGAAAATAAACATTTCCAATCTTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACTCTATCTGGACTTTCTACAGCCCCTGAATTGCTAGAAAAGACTGGTGGTTTGGTTGACGGCAGGCATTTTGTTAATGAAGCGACTATTGTCAGAAGTGTGAAATTAATTGCTGAAAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATTCAGATATTTGCTGACAACACTAACTTGGCTGTTAATCCTTCTTATGTTCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTAGCTCCATTTCTCTCCAAAGATGATCCTTTTGTCATGGCACTGAGAAAGGAATTAGAAGATCACACTGACGAGGTAAATCTGCATAGAGATGTACTAGAGGGGGTCTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAATATATATCAGGTTGCAAGTGTGACATTTGACTTGCTGTTGCTTCTAGTATTGGGATCGTATTTAATTGTGCTCTTCTGTTTCTTGGTCATCACCACTAGGGGTCTTGATGATCTAATCAGTCTATTTCGGCGGCCTCCATCTCGAAAAGTGAAAACTGCATAG 1686 0.4419 MTMAPRKPREREMLFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVQEYIAESKPLGGLIFLLPRMFSFENKDGMGNNHRDGPLKNILVELEQILIHSNLPYPVYFAFEDDNIDAVLADIKKNDVTGQPATATTGGYKFVVSAAEPRKVVSPPITNIQGWLAGLKTDDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRMRESIDYAICLDSIGSWENELWIHVSKPPENAFIKKIVEDFSSVAEELGFKVNLKHKKINISNLRVAWEHEQFSRLRVTAATLSGLSTAPELLEKTGGLVDGRHFVNEATIVRSVKLIAESLARHIYGHQGKNIQIFADNTNLAVNPSYVRSWLDVLSQTPRVAPFLSKDDPFVMALRKELEDHTDEVNLHRDVLEGVFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFCFLVITTRGLDDLISLFRRPPSRKVKTA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01055 561 SUPERFAMILY Zn-dependent exopeptidases 145 385 - -
Phco9g01055 561 ProSitePatterns EF-hand calcium-binding domain. 242 254 IPR018247 -
Phco9g01055 561 PIRSF Nicalin 3 556 IPR016574 GO:0009966|GO:0016020
Phco9g01055 561 Pfam Nicastrin 222 357 - -
Phco9g01055 561 CDD M28_nicalin_like 136 427 - -
Phco9g01055 561 PANTHER NICALIN 13 561 IPR016574 GO:0009966|GO:0016020
Phco9g01055 561 Gene3D Zn peptidases 153 390 - -
Phco9g01055 561 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01055 9 9096415 9109286 Phco9g01055 9 9096415 9109286 ECH