Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01054 ATGACTCGTGTGTTGGTCCAGAGAGGTTCTTCCGGTGGTGGTTCTTCTTCCAACGCTAGCCGGAGTGGTGGGTCTTCTTCCAATCCCTCGGTGCGTGCAGAGGCACAGGTTTTTGTTTCACTGGAGAATACCGACGAGGTTGTTGTTGTTGTGCCAGATGACGTTTTGGAGATTGGCGATAAGGGGAAGAGTGAGGAGAGTGATTTTGAGCATGGTGATGGGTCGTGTGATGATGACGTGGCTGCTGCTGCTGTTGTTGAGAGTGATGTAAGGGAGGAGTTTGTGAAGAGTGGGCTGCGAGTTGGTGAAAGGGTTGTTGCAGAGAGTGAGGGTGCGAGTGGGGATTCTTCTTCCCTCCCTGTTGGTGGTGGTTCCTGTCCCCCGCCACCTCCGGTGCCGCCTCCCAAGCCTTCTTTGGCGGGGAACATGAATCCAAGGAGGAGTGTAGCAGGGAGTTTGATTCCGGCTAGTGGTGGATCGTCGAGGAGGACATCTGCATGGCCGGTTGTTCCGGCCAGGACTTCGCCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGAGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACTCTGAACTCTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCAAGAGAGAGATCATTTTTCTCAGTTTATAACTGAAGGGTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTTTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACAGCATAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACACGCCACCAATTCGATTGAGTTTTCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGCGCTTAACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAATCTCAACAGGAACAACAGATCAATAATGCACTTTTAGCTGAGGGTCGGTTTTACTCTGATCTTGAGCTCACAGAAAAGGAAATTGAACGCATGGTCATAGAAGTTTCTCGAGCTGAGTACCTTTCAGATGGTAGTACATTTAAGCAACAGCTTGGTGACAGAGAGTCCTCTACCTCAAACGCTGAACCATCGTCTTCTGGAGCAACAGGATCATCCGGCACTGGTGGTGGGAAGGCAGAAGATGGAAAAGAGCATGGTTGTGATCTGAGTAGTGGAATGCAAATTTTACTATCGATGGGATTCACATACATTCAAGCGATTGAGGCTTACAGCATATTTGGAGACGATGTTGATTCTATGGTTTGTTACCTCTTAGAAACTGGCAGTAGCAGCAGACGAAAGGGCAAGGCCACTGAATGA 1554 0.4672 MTRVLVQRGSSGGGSSSNASRSGGSSSNPSVRAEAQVFVSLENTDEVVVVVPDDVLEIGDKGKSEESDFEHGDGSCDDDVAAAAVVESDVREEFVKSGLRVGERVVAESEGASGDSSSLPVGGGSCPPPPPVPPPKPSLAGNMNPRRSVAGSLIPASGGSSRRTSAWPVVPARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSFHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQEQQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDGSTFKQQLGDRESSTSNAEPSSSGATGSSGTGGGKAEDGKEHGCDLSSGMQILLSMGFTYIQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01054 517 MobiDBLite consensus disorder prediction 154 168 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 424 463 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 123 140 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 57 76 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 424 451 - -
Phco9g01054 517 Pfam OTU-like cysteine protease 234 337 IPR003323 -
Phco9g01054 517 Gene3D - 208 359 - -
Phco9g01054 517 PANTHER OTU DOMAIN CONTAINING PROTEIN 170 357 - -
Phco9g01054 517 FunFam OTU domain-containing protein 5 207 359 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 101 198 - -
Phco9g01054 517 ProSiteProfiles OTU domain profile. 226 349 IPR003323 -
Phco9g01054 517 SUPERFAMILY Cysteine proteinases 213 349 IPR038765 -
Phco9g01054 517 MobiDBLite consensus disorder prediction 1 31 - -
Phco9g01054 517 MobiDBLite consensus disorder prediction 176 190 - -
Phco9g01054 517 CDD OTU_plant_OTU6-like 222 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01054 Phco-Chr9 9087240 9092838 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01054 9 9087240 9092838 Phco9g01054 9 9087240 9092838 ECH