Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00961 ATGGCTCCAAAACGTGCTGAGAAGTTGGTGGTGAGATCCACCAAGAAAGTTGTGGAATCAAGTGTGCAAGTATCTGTTGTAAGCAGCAGCAGCAAAAGACAAACTCGGGGAAACAAAGATAATATTCAAACAGAAGAAGCAGTAGGTGGCGTAGAGCATGTGATGGTCATTCCCATTCAAGAAGTGAATCCTCAAGCCCAAAAGGATTCCTCTACCTCTGCCATGACTAATGAAAACAAAGGTGAGCAAGAGAACAGTGTTCAAGATGATGGAGTTCAAAATGAAGAGAAAAAGAAGAAGGGAGAGAATGAGGAAGTTAAGGAGGAGAAGAAGGGCAGGTTCCCAAAAGGGCCTAATGGTAAAGAGAAAAAGTTGGGGAAAAAGAAGGGGAGGAGAAGTGCAGAAGGGTATCAGAGGTATGTGTATAGGGTGTTGAAGCAGGTGCACCCTGAAATGGGAATCTCTTCCAAATGCATGACTATTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTGGCTGGTGAGGCTTCTAAGCTGAAGGACTACACTGGACACATGACATTGTCTTCAAGGGAGATTCAAGGAGCAGTGAAGCTGGTTTTGCCAGGAGAGCTTGGAAAGCATGCCATTGCTGAAGGTGTCAAAGCTGTCAATAACTTCACCTCCTATAATGCCTGA 681 0.4449 MAPKRAEKLVVRSTKKVVESSVQVSVVSSSSKRQTRGNKDNIQTEEAVGGVEHVMVIPIQEVNPQAQKDSSTSAMTNENKGEQENSVQDDGVQNEEKKKKGENEEVKEEKKGRFPKGPNGKEKKLGKKKGRRSAEGYQRYVYRVLKQVHPEMGISSKCMTILNNLMNDMFERLAGEASKLKDYTGHMTLSSREIQGAVKLVLPGELGKHAIAEGVKAVNNFTSYNA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00961 226 MobiDBLite consensus disorder prediction 20 37 - -
Phco9g00961 226 Pfam Core histone H2A/H2B/H3/H4 88 200 IPR007125 GO:0003677
Phco9g00961 226 SMART h2b3 127 223 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 MobiDBLite consensus disorder prediction 63 88 - -
Phco9g00961 226 FunFam Histone H2B 70 224 - -
Phco9g00961 226 SUPERFAMILY Histone-fold 109 223 IPR009072 GO:0046982
Phco9g00961 226 Coils Coil 92 112 - -
Phco9g00961 226 Gene3D Histone, subunit A 61 224 IPR009072 GO:0046982
Phco9g00961 226 PANTHER HISTONE H2B 97 223 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 MobiDBLite consensus disorder prediction 20 132 - -
Phco9g00961 226 MobiDBLite consensus disorder prediction 90 121 - -
Phco9g00961 226 PRINTS Histone H2B signature 156 176 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 PRINTS Histone H2B signature 178 195 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 PRINTS Histone H2B signature 208 221 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 PRINTS Histone H2B signature 137 155 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00961 226 PRINTS Histone H2B signature 195 208 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00961 Phco-Chr9 7851637 7852317 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00961 9 7851637 7852317 Phco9g00961 9 7851637 7852317 ECH