Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00959 ATGACGAACTCCGACGCCGTTTGCGGAATGACTTTGTTTTGCCGAGGATTGAGTGAAGGTAGCGGTGAAACCTTCAATTGGAAAATTCTGAAGCTTGGATTTTGTTTCCTTGATGGGGCTAATGCTGGTGATGTTATTGGCAAGGAGAATCTGCTTGCTTGCCAGAAAAGTAAAGTAGAAATGGCTATTGCTGGTCTACACAGTGTGTCTGTGCTCGACTCTCCTTTCCTCAGGGACTCCCATTCCCAGTCGTCTAGGAGAGGGGGAGAGGGAAGACGGGGAAGCACCCGGTCATCTTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCAAGTACAAGGAAGACCTGGTGAGGTACCTCTTGAGCAAAGGAGGGGGGATGGGTTGATTGCTGAGCTCTCACAGGAAGATAGATTGGATATCCAAGAGAGAGGGCAGGGACATGTTTTAGAAGATGCAGTTTTGGGTGAGAATGAATCTGAAACGTGGTCGCAGTCACAAAGTCAGAATGAGTCCCATGAAGATCACGAGGATTTAAATAATTCTAGTTGTGAAAACTCTTCTGATCTAGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCCAGGGATCATGTATCAAACGTATCCAGAAGAAATAGTGGTTCAAGGAGAGAATGGCTTGGGGAAACTGAGCAGGAAAGGGTGAGAATTATTCGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAAGTGTTTCCTCTGGGGAAAACACGGAAGAATCATCTGCTGAAATTGGTACACAAATTGAACGTGTTCGTGATGGACTCATCGTCAACCAGAATGGGGGCCAAAATGAGCTTTCACGGAGGGGGATACGTAAATTATGTGGCCGACAGGCTATGCTTGATATGCTTAAGAAGGCTGAAAGAGAGAGGCATAGAGAAATTGAGGACTTGTCGGTACACCGGGCTGTATCTCAATTCCCCTATCGTAATCGCATTCAGGCGTTGCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGTTGATAATAACAGGCCCCTTTCTGTTGCAGAAAGTGAATTGGGCTTCTTGAGGCGTAAACAAACTGTCTCAGGTCTAAGGGAGGGATTTATCGCTAGAAAGGAGAATAGTGGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCAAATGTTGATATTGATCTTAACACTAATGAACAAATGGGATCTAGCAGTTCACATTTGGTCCCAATTGTACATTCTGAACTGTCTGACCCTAATGACAGAGGAAGCGATGGTCTCGGGGTATCGCACGGCCAGAGCTGTTTACAAGGTACCACATCTGAGAATCTCAATTGGCAAGAATCTATTGCTCAAGTAGGACATGGAATGAAGCATTTGCCTATTGAATCACTAGATTGTCAATCATCATTCAGTGCCAGTGTTGAAAGAGTGAACAGCACCGAGCAAAATGTTGATGTGATGCCAACTGAATATAATGAAATTACCCAACAAAGCTTGCGAATTGAAGATTCACATCATAGTAATAACCAGGAATTCAGCGAGGTGCATATTGAGCATTCTCAGCTGGGTGATATAAATAGTATTGAAAACAATTCTTCAAATCATGATATTCGTATGGATGGTAATGTTGTTGATGATGTAAATTGGAATGAATCTGGTGATCTAGAAGTAGAACAGCCAGAAGAAGCTTTTGAAAATGAAGGAAGTGAGTGGTATCAGAATAATACCGAATGGAGAAATATCACTGAGGAAAATGCGGATGGTAATCAGCTCAGTAATTCGGCAAATGAGTGGCCTGAAAACACTTCGGGAAATGGGGATGGAGAAAACTCTCATCTGCAAGAATCTCATGGAGCATGGCAAGAAGATGGTAGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCTTCAGATCATGAAAGTGCTCCAGCTGGTAGAATTCGAGGATTTTATTTTCCTGAAGACGACAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTCCGGGATAGTCTTGATCAGTTAATACAATCATATGTTGAAAGGCAAGGAAATGCACACGTTGACTGGGAATTGCAAGAAACAAACCCTTCATCTGACTCAGCAGAACAGGACCTTGAACAGCGAAGTAGGGATCAAATTGTTGATCAGGAGGGTACTGTTAATAGTTCACTTGATCTGCCCTCTTTACCTATACCGCCTCCTCTGCCTCTGTGGGACCAGCACCACCACCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTCTAGGAATTGATTGGGAGATTGTGAATGACTTGAGAATTGACATGGCTCGATTGCAACAAAGGATGAATAACATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGCTCTATAAGACAAGAAGTTTCTGCAGCCCTAAATCGCTCTGCCGATTCATCTGATATACATGATTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTGAGAAAAGGTCTTTGCTGTGTATGCCGCGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGTCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTCCGAAGCAGGAAAAAATGTCCTATGTGTCAAGCTCCTGTGGTGGAGGTGATACGGGCTTACTCTATACAATAA 2763 0.4361 MTNSDAVCGMTLFCRGLSEGSGETFNWKILKLGFCFLDGANAGDVIGKENLLACQKSKVEMAIAGLHSVSVLDSPFLRDSHSQSSRRGGEGRRGSTRSSSLLQMWREIEDEHVVNQVQGRPGEVPLEQRRGDGLIAELSQEDRLDIQERGQGHVLEDAVLGENESETWSQSQSQNESHEDHEDLNNSSCENSSDLGEVERERVRQIFREWMNSGARDHVSNVSRRNSGSRREWLGETEQERVRIIREWVQMSSQQRSVSSGENTEESSAEIGTQIERVRDGLIVNQNGGQNELSRRGIRKLCGRQAMLDMLKKAERERHREIEDLSVHRAVSQFPYRNRIQALLRGRFLRNDRPVDNNRPLSVAESELGFLRRKQTVSGLREGFIARKENSGCSQATSNVSDTSSNVDIDLNTNEQMGSSSSHLVPIVHSELSDPNDRGSDGLGVSHGQSCLQGTTSENLNWQESIAQVGHGMKHLPIESLDCQSSFSASVERVNSTEQNVDVMPTEYNEITQQSLRIEDSHHSNNQEFSEVHIEHSQLGDINSIENNSSNHDIRMDGNVVDDVNWNESGDLEVEQPEEAFENEGSEWYQNNTEWRNITEENADGNQLSNSANEWPENTSGNGDGENSHLQESHGAWQEDGSFQEAVENWLGGPSDHESAPAGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVERQGNAHVDWELQETNPSSDSAEQDLEQRSRDQIVDQEGTVNSSLDLPSLPIPPPLPLWDQHHHHRDNWSQNDINNQRLGIDWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSADSSDIHDCESPEDKSKWECVRKGLCCVCRESNIDSLLYRCGHLCTCSKCANELLRSRKKCPMCQAPVVEVIRAYSIQ 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00959 920 MobiDBLite consensus disorder prediction 603 637 - -
Phco9g00959 920 Coils Coil 796 823 - -
Phco9g00959 920 MobiDBLite consensus disorder prediction 162 197 - -
Phco9g00959 920 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 61 920 - -
Phco9g00959 920 CDD mRING-HC-C3HC5_NEU1 868 917 - -
Phco9g00959 920 SUPERFAMILY RING/U-box 867 913 - -
Phco9g00959 920 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 852 918 IPR013083 -
Phco9g00959 920 Pfam Zinc finger, C3HC4 type (RING finger) 865 912 - -
Phco9g00959 920 MobiDBLite consensus disorder prediction 430 451 - -
Phco9g00959 920 ProSiteProfiles Zinc finger RING-type profile. 868 907 IPR001841 -
Phco9g00959 920 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00959 Phco-Chr9 7827864 7832355 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00959 9 7827864 7832355 Phco9g00959 9 7827864 7832355 ECH