Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00955 ATGGCACTCTCACACTCCATCTCTGCGTTATCAACAACACTCACGCTTTCCTCCCCAATAAGCAAACCCATCACCAACAAAGTGAATTCCTTTCCCTTCTTCTCCAACAAGGGTACGCAATTTTTCACGAAACAAACTCGACCCAGAAGCGGAACAAGCGTTTTGCTTACCCCTGCACGCGTTGCCGCGCCACCCTCAACGGTTGAAACCGATCAATCGTTCCCTGAAACCGAAAGGGGGGAGACCGAGGAAGAGTTTAACGAGGAGAGCTCTTCCTCTAAGTTCTCCTGGAGGGATCACTGGTACCCTGTTTCGTTAATTGAGGATCTGAACCCTCTCTTCCCCACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTCTATCTGAAGGAAGAATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGTTGTGGATCTTGTGTTAAGATTCCTCAGGCTGCATCTGAAGGCCCAGAAGCACGTGCTATTCGATCTCCTAAAGCGTGTGCCACTAGGTTCCCAACTCTAGTGTCTCAGGGCTTACTCTTTGTTTGGCCTGATGAAAATGCTTGGGAGAAAGCAAGTGCCTCCAAGCCTCCAATGTTGCCTGATGACTATGAAAAACCGGAGTTTGCCACGGTTAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTAATGGAGAATGTCTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCGAATGAAGGGAACCCTAAGATCAGTGCCAAATTTGTTGCACCTTGTTATTATATGAACAAGATTGAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTTGTATGGATATGTTCCTTCAATGTTCCCATGGCACCTGGTAAGACTCGCTCCATAGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTACCAGGGCCTTCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCGAACAAGGTATATGATGGAGACATGATAGTTCTTCAAGGCCAAGAGAAAATCTTCCTTTCACAAACCAAGGAAGGAGCTGACATTAACAAACAGTACACTAGCATCACCTTCACACCAACACAAGCAGATCGCTTTGTCTTGGCGTTTCGAAACTGGCTGAGACGACATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAGCCATTGCCATCAACTGTTTTATCGAAACGTGAGATGTTGGATAGATTTGAACAGCATACTCTCAAGTGTTCATCATGTAAAGGAGCTTATGAGGGATTCCAAATATGGCAGAAAGTCCTAATTGGTTCAACAGTTGTGTTTTGTGCAACATCAGGGATTCCAGCAGATGTTCGGTTGCGTGTTCTTTTGGCTGGATTTGCAGTTGTGAGCGCAGCCTTAGCTTTTGCCCTAAACCAACTCCAAAAGAATTTTGAATTTGTCGATTACGTGCATGCCGAAATAGAATAA 1644 0.4635 MALSHSISALSTTLTLSSPISKPITNKVNSFPFFSNKGTQFFTKQTRPRSGTSVLLTPARVAAPPSTVETDQSFPETERGETEEEFNEESSSSKFSWRDHWYPVSLIEDLNPLFPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIRSPKACATRFPTLVSQGLLFVWPDENAWEKASASKPPMLPDDYEKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPKISAKFVAPCYYMNKIEIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPSWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSQTKEGADINKQYTSITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKREMLDRFEQHTLKCSSCKGAYEGFQIWQKVLIGSTVVFCATSGIPADVRLRVLLAGFAVVSAALAFALNQLQKNFEFVDYVHAEIE 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00955 547 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 213 IPR017941 GO:0051537
Phco9g00955 547 SUPERFAMILY Bet v1-like 208 443 - -
Phco9g00955 547 CDD Rieske_RO_Alpha_PaO 94 224 - -
Phco9g00955 547 Gene3D - 240 442 - -
Phco9g00955 547 MobiDBLite consensus disorder prediction 74 91 - -
Phco9g00955 547 Gene3D - 96 239 IPR036922 GO:0051537
Phco9g00955 547 MobiDBLite consensus disorder prediction 60 91 - -
Phco9g00955 547 Pfam Rieske [2Fe-2S] domain 100 183 IPR017941 GO:0051537
Phco9g00955 547 SUPERFAMILY ISP domain 94 220 IPR036922 GO:0051537
Phco9g00955 547 Pfam Pheophorbide a oxygenase 309 404 IPR013626 GO:0010277
Phco9g00955 547 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 43 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00955 Phco-Chr9 7773012 7777402 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00955 9 7773012 7777402 Phco9g00955 9 7773012 7777402 ECH