Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00950 ATGATTGAGAGATTCACACACACATTCTCTGTTGCATTATCACAAACATCTAAACCTCTTTCACTCTCCGTCACAATGCATCTAGCAATGGCAGCCAACGCTGTTGTCGCTCCGTCGCCGTTCCAACCCAGTTCACTTCTCCGCTCACCATTCTCCGGCGTCTCCGTTAAGCTCACTCCCCAATCCCTAACCCTTTCGCGCTCGAAGACCCTCACCGTCCTCGCCGCCACCAAGAAGGCCGTTGCCGTCCTCAAGGGCAACTCTGCCGTCGAAGGCGTCGCCACCCTAACACAAGAAGACGATGGCCCAACAACGGTCAGTGTTCGCATTACTGGCCTTACTCCGGGGCTTCATGGTTTTCACCTACATGAGTATGGTGATACCACAAATGGGTGTATTTCAACAGGAGCACATTTTAATCCTAACAAGGTGACACATGGTGCTCCGGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGATGGGGTTGCAGAGGTTTCAATTGTGGATAATCAGATACCACTCACTGGCCCCAATTCAGTAGTTGGAAGAGCCTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAGGGGGGTCATGAACTTAGTTTGACAACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGCATAA 690 0.5072 MIERFTHTFSVALSQTSKPLSLSVTMHLAMAANAVVAPSPFQPSSLLRSPFSGVSVKLTPQSLTLSRSKTLTVLAATKKAVAVLKGNSAVEGVATLTQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKVTHGAPEDEVRHAGDLGNIVANADGVAEVSIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00950 229 CDD Cu-Zn_Superoxide_Dismutase 78 221 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 54 226 IPR024134 GO:0005507
Phco9g00950 229 Gene3D Superoxide dismutase, copper/zinc binding domain 74 228 IPR036423 GO:0006801|GO:0046872
Phco9g00950 229 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 213 224 IPR018152 -
Phco9g00950 229 FunFam Superoxide dismutase [Cu-Zn], chloroplastic 75 228 - -
Phco9g00950 229 Pfam Copper/zinc superoxide dismutase (SODC) 90 224 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 119 129 IPR018152 -
Phco9g00950 229 PRINTS Cu-Zn-superoxide dismutase family signature 174 196 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 PRINTS Cu-Zn-superoxide dismutase family signature 199 225 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 PRINTS Cu-Zn-superoxide dismutase family signature 155 164 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 PRINTS Cu-Zn-superoxide dismutase family signature 119 141 IPR001424 GO:0006801|GO:0046872
Phco9g00950 229 SUPERFAMILY Cu,Zn superoxide dismutase-like 79 226 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00950 Phco-Chr9 7718676 7726630 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00950 9 7718676 7726630 Phco9g00950 9 7718676 7726630 ECH