Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00935 ATGGCATCATCACTATCCTTCTCCAAACTTTCTCTGTTGCTTTTCTTCGCATCATTTTCTTTCTCCTATGCAACTTCTCGCATCACTCATCACCCTGCATACCCAACACAATCATCAAAAGCAGAAAAACTCATAAGAAGCCTCAACCTATTCCCAAAGGAACCCTTCAACAGCATTGAAGGTGACCATGAAGGTTTTGTCCCTGGTAAGATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGGCCTCCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTACTTTTTATTTGAATCACGAAGCAGTAAGGATGATCCTGTTGTCGTATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTATGAAAATGGTCCTTTTCATATTACCAATAACTTGTCTCTTACATGGAATGATTATGGCTGGGATCAGGCATCAAATATTATATTTGTTGACCAACCTACAGGTACAGGTTTTAGTTACACTTCTGATACCAGTGACCTTCGCCAAGATGAAACTGGAGTTAGCATTGATTTATATGACTTCTTGCAGGAGTTTTTCAAGGCTCATCCTGAGTTGGTTAAGAATGACTTTTATATCACTGGAGAATCGTACGCTGGACACTATATTCCTGCACTTGCTTCACGGATCAACCAAGAAAATAAAATGAAACAAGGAATCCATATAAACCTCAAGGGTTTTGCTATTGGTAACGGGTTTACATATCCTGCAGTTCAATACCAAGCATACCCAGAATTTGCGTTAGACAACGGACTAATTACCAAGAAGGAGGCAGATGATATCAGCAAGTTAATCCCACAATGTGAAGAAGCTGTTAAAACCTGCGAATCTCGGGGTGGAACAACTTGTGAGGATGCATATGATACTTGTGAAGAAATCTTCAATGGAATATTGTCCATTGATGTTGATATTAATTACTATGACATTAGAAAGAAATGTGTGGGAGCTTTGTGTTATGACTTCAGCAACGTGGAGAAGTTGTTAAACCAGGAGAACGTGAAGAGTGCTTTAGGTGTGGGGAAGGGCTTGAAGTATGTTTCATGCAGTACAGCAGTGTATGATGCTATGCGGCAAGACGCCATTAAAAATCTGGCAGTGGAGATTCCTGCTCTTCTTGAGGATGGGATCAATGTGCTTGTGTATGCTGGGGAAAAGGATCTCATATGCAATTGGATTGGGAATTTAATGTGGGTCCATGCCATGAATTGGTCAGGCCAAAAGGCATTTGGGGCATCTCCTACAGTGAAATTTGTAGTTGATGGTGCAGAAGCAGGGTCTCTAAACAGCTACAGACCTCTCTCTTTCCTCAAGGTACATGAGGCTGGGCACCTGGTACCTATGGATCAACCAAAAGTTGCACTACAGATGTTGAAAAGTTGGATGGGAGGGAAACTGATGAACTCAGCAGCAGATAATTAG 1491 0.4185 MASSLSFSKLSLLLFFASFSFSYATSRITHHPAYPTQSSKAEKLIRSLNLFPKEPFNSIEGDHEGFVPGKIVEKKFSFLGDSGPPVEDLGHHAGYYSLPHSKAARMFYFLFESRSSKDDPVVVWLTGGPGCGSELALFYENGPFHITNNLSLTWNDYGWDQASNIIFVDQPTGTGFSYTSDTSDLRQDETGVSIDLYDFLQEFFKAHPELVKNDFYITGESYAGHYIPALASRINQENKMKQGIHINLKGFAIGNGFTYPAVQYQAYPEFALDNGLITKKEADDISKLIPQCEEAVKTCESRGGTTCEDAYDTCEEIFNGILSIDVDINYYDIRKKCVGALCYDFSNVEKLLNQENVKSALGVGKGLKYVSCSTAVYDAMRQDAIKNLAVEIPALLEDGINVLVYAGEKDLICNWIGNLMWVHAMNWSGQKAFGASPTVKFVVDGAEAGSLNSYRPLSFLKVHEAGHLVPMDQPKVALQMLKSWMGGKLMNSAADN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00935 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 FunFam Carboxypeptidase 78 496 - -
Phco9g00935 496 Pfam Serine carboxypeptidase 88 486 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 Gene3D alpha/beta hydrolase 72 495 IPR029058 -
Phco9g00935 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 85 474 IPR001563 GO:0004185|GO:0006508
Phco9g00935 496 SUPERFAMILY alpha/beta-Hydrolases 89 489 IPR029058 -
Phco9g00935 496 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00935 Phco-Chr9 7572366 7574629 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00935 9 7572366 7574629 Phco9g00935 9 7572366 7574629 ECH