Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00927 ATGGGCGCGAAAAAGAAGACAGGTGGCGGAAACGGCAACAAGGAGAACCAGGACGCCACCACCACCGTCGTTTTAAAGCTCGACTTCCACTGCGACGGTTGCGCTTCCAAAATCATTCGACACCTTCGTGCTTTCCAAGGTGTGGAGACTGTGAAGGCGGAGGACGACGTCGGGAAGGTGACAGTCACCGGGAAAGTGGACCCCGTGAAGGTGAGGGACAACCTGGCGGAGAAGATGAAGAAGAAGGTGGAAATCGTCTCTCCACAGCCCAAGAAGGAGAAGGAGAAGGAGGAGAATAAAGACACCAAAACGAATAACAAAACCCAGGACAAGAAAAACAAGGAAAAAGAGGTGGTGACTACCGCGGTTCTGAAGATGGCACTGCATTGCCAAGGTTGCTTGGACAGGATTGGCAAGACTGTGCTGAAAACCAGAGGAGTGCAAGAAATGGCTATAGACAAGGAAAATGAAACGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGCGGAGAATCTAACGGAGAAGCTGAAGAGGAAGGTTGAGGTGGTCCCTCCCAAGAAAGAGAAGGATGGTGACAAGGACAAGGAAGGATCAGGGAAGAAGAAGAACAAGGGCGGTGGAGGAGGAGGAGATAATAATGAAGAGGGAGTAGAGAAAATAGATTACAGCAGAATGGAGTATGTTCCGCAACCTTCTTTTGGCTTTGGTTATGGTTATGGACACGGCAATATTGGTGGCTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTACATGCACCAGCACCACAAATTTTTAGTGACGAGAACCCAAATGCTTGTTCTGTCATGTGA 849 0.4923 MGAKKKTGGGNGNKENQDATTTVVLKLDFHCDGCASKIIRHLRAFQGVETVKAEDDVGKVTVTGKVDPVKVRDNLAEKMKKKVEIVSPQPKKEKEKEENKDTKTNNKTQDKKNKEKEVVTTAVLKMALHCQGCLDRIGKTVLKTRGVQEMAIDKENETVTVKGTMDVKALAENLTEKLKRKVEVVPPKKEKDGDKDKEGSGKKKNKGGGGGGDNNEEGVEKIDYSRMEYVPQPSFGFGYGYGHGNIGGYSYVPVYPEQMHFHLHAPAPQIFSDENPNACSVM 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00927 282 MobiDBLite consensus disorder prediction 83 115 - -
Phco9g00927 282 ProSiteProfiles Heavy-metal-associated domain profile. 119 190 IPR006121 GO:0046872
Phco9g00927 282 Pfam Heavy-metal-associated domain 29 82 IPR006121 GO:0046872
Phco9g00927 282 Pfam Heavy-metal-associated domain 127 182 IPR006121 GO:0046872
Phco9g00927 282 MobiDBLite consensus disorder prediction 181 204 - -
Phco9g00927 282 SUPERFAMILY HMA, heavy metal-associated domain 119 182 IPR036163 GO:0046872
Phco9g00927 282 SUPERFAMILY HMA, heavy metal-associated domain 20 85 IPR036163 GO:0046872
Phco9g00927 282 Coils Coil 92 112 - -
Phco9g00927 282 ProSiteProfiles Heavy-metal-associated domain profile. 20 91 IPR006121 GO:0046872
Phco9g00927 282 CDD HMA 128 183 IPR006121 GO:0046872
Phco9g00927 282 CDD HMA 30 84 IPR006121 GO:0046872
Phco9g00927 282 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 282 IPR044594 GO:0046872
Phco9g00927 282 MobiDBLite consensus disorder prediction 181 218 - -
Phco9g00927 282 Gene3D - 116 192 - -
Phco9g00927 282 Gene3D - 18 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00927 Phco-Chr9 7385551 7386880 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00927 9 7385551 7386880 Phco9g00927 9 7385551 7386880 ECH