Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00893 ATGGCCGGCAAAGGTGGGGCGACTCCGGCGACATACTCGCCTTCTCTGACAGTCGATAAAAAGAAACCACCGCTTTTCAAGGAAGATTGGGTTCGGCCCGATGGCCGCGGTTTCCACCAGTGCAGACCCGCATTTTTCAGGACTGGTGCTGTGAATGCAGCATCTGGATCTGCTTATGCCGAGTTTGGAAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTACAGTGATACAGGGCGTTTGAATTGCAATGTCAGCTTTACAACATTTGCAACTCCAGTGCGAGGGCAGGGTTCAGACCACAAAGAGTACAGTGCGATGCTTAATAAAGCTTTGGAGGGCGCAATACTACTGGAAAGTTTCCCCAAGACAACTGTGGATGTTTTTGCATTGGTGCTAGAATCTAGCGGCAGTGATCTCCCAGTTGTTATATCGTGTGCTAGCCTTGCCCTGGCGGATGCTGGAATAATGATGTATGATCTTGTTGCCTCGGTTTCTGTGTCAAGTTTTAGTAAGAACCTTGTCATTGATCCTATTTTGGAGGAGGAAAACTGCCAAGATGGTAGCTTAATGATTACATGCATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACCGGGGAATGGTCTTCCCCGAAGATTAACGAGGGAATGCAGCTGTGCTTGGATGCTTGTGCTAAGCTAGCGAAGATTATGAGATCATGTTTGAAAGAAGCTGCTTCGGATTCCAGGGAGTAG 765 0.4771 MAGKGGATPATYSPSLTVDKKKPPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYSAMLNKALEGAILLESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSKNLVIDPILEEENCQDGSLMITCMPSRYEITQLTVTGEWSSPKINEGMQLCLDACAKLAKIMRSCLKEAASDSRE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00893 254 Gene3D - 19 253 IPR027408 -
Phco9g00893 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 195 IPR020568 -
Phco9g00893 254 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Phco9g00893 254 CDD RNase_PH_MTR3 41 247 - -
Phco9g00893 254 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Phco9g00893 254 FunFam Exosome complex component RRP41-like 11 250 - -
Phco9g00893 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 250 IPR036345 -
Phco9g00893 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00893 Phco-Chr9 7001195 7005799 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00893 9 7001195 7005799 Phco9g00893 9 7001195 7005799 ECH