Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00863 ATGGTTAAATGTAGAGAAAAAGAAGGACAATTTACACACTCTGTTCGTGTCCCAACTTGTAAGTTATCTAAAAACACCGCTTTCACCCTTTCTTCCTGTCGCCGGTTTCCGGCAAAACATGTTTTGACGGGCATGAATTCCGTCGAATCATGCGGCGTACTCGAGATCCGGTCCTTCTCCGCACTTGCAGATGATTCTGTCTCTGAAGCCGGAAAACAGATAACGAAAATTGCTGATTGTCTGATTTTAATTGAAGTTCATAGACTTGATGGAAAGACTACAGAGATGGAGTTTGGTGGCATGTTTGGTGACATGACAAAGAAAATACGTTTGGCTTGTTCCTTGCAGGAGGGTGAAGGGAAAGGGAATAATAGCTTTGTGGATTTGGATACAAGGGAGGGAGTGAATGATGGTTTCCCTAGAATTGGACCAAATGATTCGCTTCTCCCTGGTCTTTTTGATGATGTTGCGCTAAATTGTCTTGCTAGGGTTAGTAGATCTGATTATGCTTCACTCGCATGTATAAATAGACGGTACAACTTGTTGATTAGGAGTGGGTATCTGTCCGGGTTGAGGAAGAAGTTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGCATTTGACCCCAAGAGAAATAGATGGATAACATTACCTAAAATACCTTGTGATGAGTGTTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTGCCGTGGTTGGGTGAAGTGTCAGGAGATGAACCGACCCCGGTGCTTGTTCGGATCTGGCAGTCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCGGCTGAGTTGTATGACTCTTCTTCAGGTACATGGGTACTGTTGCCGAACATGCACACACCACGTAGATTGTGTTCTGGTTTTTTCATGGATGGAAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTATGATCTTAAGACAAGAAATTGGCGGAAAATAGAGGGTATGTATCCATATGTTAATGGGGCTGCTCAGGCTCCTCCGCTTGTGGCAGTTGTGGATAATGAGTTGTATGCAGTTGAGCATCTTACCAACATGGTAAAGAAATATGACAAGGAAGATAACACCTGGAGTGAATTGGGAAGGCTTCCAGTACGGGCGGATTCTTCAAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGGGTGGGCAAAGGGGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGGACGGGGGTCAGGAGTGGAACCATAGATTGGCAAGTACTTGGTGTGAAGGAGCACGTTGGGGTGTTTGTTTACAATTGTGCTGTTATGGGATGGTCTGGTGAGATGCTTCTAGATTGA 1506 0.4449 MVKCREKEGQFTHSVRVPTCKLSKNTAFTLSSCRRFPAKHVLTGMNSVESCGVLEIRSFSALADDSVSEAGKQITKIADCLILIEVHRLDGKTTEMEFGGMFGDMTKKIRLACSLQEGEGKGNNSFVDLDTREGVNDGFPRIGPNDSLLPGLFDDVALNCLARVSRSDYASLACINRRYNLLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLICRGWVKCQEMNRPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSSSGTWVLLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNELYAVEHLTNMVKKYDKEDNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPRTGVRSGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00863 501 Gene3D - 204 478 IPR015915 GO:0005515
Phco9g00863 501 Pfam Kelch motif 328 373 IPR006652 GO:0005515
Phco9g00863 501 Pfam Kelch motif 280 325 IPR006652 GO:0005515
Phco9g00863 501 FunFam F-box/kelch-repeat protein SKIP11 194 478 - -
Phco9g00863 501 SUPERFAMILY Kelch motif 212 451 IPR015915 GO:0005515
Phco9g00863 501 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 145 493 - -
Phco9g00863 501 CDD F-box_AtAFR-like 148 192 - -
Phco9g00863 501 SMART kelc_smart 340 392 IPR006652 GO:0005515
Phco9g00863 501 SMART kelc_smart 292 339 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00863 Phco-Chr9 6689095 6691948 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00863 9 6689095 6691948 Phco9g00863 9 6689095 6691948 ECH