Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00858 ATGAGAGCGACACATGTTCTGTTTGTTTTGCTTTGGTTCTTCTCCGTTTATTCCCCTGCTGCGTTTTGCGCAAATGTCACGTATGACCACAGAGCATTGGTCATTGACGGCAAGCGCCGAGTGTTGTTCTCTGGTTCTATTCATTATCCTCGTAGCACTCCAGAGATCTGGCCAGACCTCATTCAGAAATCCAAAGATGGTGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGCAGATTTGGTTAAATTTGTGAAGGCAGTAGCAGCAGCAGGTCTGTATGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAGTTCAGTTCCGAACTGATAACAAACCGTTCGAGGAAGAAATGAAGCGTTTCACTGCTAAGATTGTGGATATGATGAAGCAAGAGAACCTCTATGCATCACAGGGAGGACCTATTATTTTGTCTCAGGTCGAAAATGAGTATGGAAACATTGATGCGGCCTATGGTCCTGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGACCCAATTATTAACACATGCAATGGATTTTACTGCGATCAATTCAATCCAAACTCTAACTCAAAACCAAAAATGTGGACTGAGAACTGGACTGGATGGTTTCTCTCATTTGGCGGTGCTGTGCCTTACAGACCAGTGGAAGATCTTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAGAATTACTATATGTACCATGGAGGGACTAATTTTGGCCGAAGTTCTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCTCCAATTGACGAGTATGGAATTGTTAGGCAGCCTAAGTGGGGCCACCTTAAAGATGTGCATAAGGCCATAAAACTTTGTGAAGAAGCACTGATAGCGACTGATCCTACCATTACAACTCCTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGATCTGCATGTGCAGCCTTCCTTGCCAACATTGCCACATCTGATGCAACAGTGACCTTTAATGGAAATTCATATCACTTGCCTGCATGGTCTGTAAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCAGAACTGAATCCTTAAAAGAAGAGGTTGGTTCTGGCTCAGGATGGAGTTGGATTAGTGAACCCATCGGTATTTCGAAGGCTGATTCATTCTCAAAATTTGGATTACTGGAGCAAATAAATACAACTGCTGATAAAAGTGATTATTTGTGGTACTCGTCGAGTATTGATCTTGAAGAAAATGCTGATTCTCAAACTGTTCTTCACATTGAGTCCCTTGGTCATGCTCTTCATGCTTTCATAAATGGGAAGCTAGCAGGGAGTGGAACTGGAAACAGTAACAAAGCTAAGGTTGAAGTAGACATCCCCATCAAACTAGTGGCTGGGAAGAACATGATTGATCTCCTGAGTTTAACAGTGGGACTTCAGAACTATGGAGCTTTTTTTGATACATGGGGTGCGGGGATCACTGGTCCAGTGATATTGAAAGGTTTGAAGAATGGAACCACTGTTGATCTCTCCTCCAAACAGTGGACATATCAGGTTGGCCTTAAAGGTGAAGATTTAGGCCCATCAAGTGGAAGTTCTGGACAGTGGAATTCACAATCTGATTTACCTACAAATCAACCCTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCGGGAAGTAACCCAGTTGCAATTGACTTCACCGGGATGGGAAAAGGCGAGGCTTGGGTGAATGGACAGAGCATTGGACGATACTGGCCCACATATGTCTCTCCAAATGGCGGTTGTGCTGACTCGTGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGTGGGAAACCATCACAGACATTATACCACGTACCGCGATCATGGTTACAACCAGATAGCAATACACTTGTATTGTTTGAGGAAAGTGGAGGTGACCCTAGGCAAATCTCTTTTGCTACAAAACAGATAGGAAGCGTGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGATACAAAAGTAGGGCCTGTACTGTCACTGGAGTGCCCTTATCCTAATCAGGCGATCTCTTCCATTCAATTTGCAAGTTTTGGAACGCCTTATGGGACTTGTGGGAACTTCAAACATGGACGGTGCAGAAGTAATAAGGCTCTATCCATTGTTCAGAAGGCCTGCATTGGATCAAACAGTTGTAGAATTGGACTATCACTTAATACATTTGGAGATCCATGTAAAGGAGTGGCAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2496 0.4359 MRATHVLFVLLWFFSVYSPAAFCANVTYDHRALVIDGKRRVLFSGSIHYPRSTPEIWPDLIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGVQFRTDNKPFEEEMKRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGPAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFNPNSNSKPKMWTENWTGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIKLCEEALIATDPTITTPGPNIEAAVYKTGSACAAFLANIATSDATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFRTESLKEEVGSGSGWSWISEPIGISKADSFSKFGLLEQINTTADKSDYLWYSSSIDLEENADSQTVLHIESLGHALHAFINGKLAGSGTGNSNKAKVEVDIPIKLVAGKNMIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGTTVDLSSKQWTYQVGLKGEDLGPSSGSSGQWNSQSDLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNGGCADSCNYRGAYSSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPRQISFATKQIGSVCSHVSESHPPPVDLWNSDTKVGPVLSLECPYPNQAISSIQFASFGTPYGTCGNFKHGRCRSNKALSIVQKACIGSNSCRIGLSLNTFGDPCKGVAKSLAVEASCA 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00858 831 Gene3D - 566 727 - -
Phco9g00858 831 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Phco9g00858 831 FunFam Beta-galactosidase 416 566 - -
Phco9g00858 831 SUPERFAMILY Galactose-binding domain-like 398 567 IPR008979 -
Phco9g00858 831 FunFam Beta-galactosidase 21 341 - -
Phco9g00858 831 PANTHER BETA-GALACTOSIDASE RELATED 18 771 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 CDD Gal_Rha_Lectin_BGal 728 830 - -
Phco9g00858 831 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Phco9g00858 831 ProSiteProfiles SUEL-type lectin domain profile. 745 831 IPR000922 GO:0030246
Phco9g00858 831 Gene3D Glycosidases 20 341 - -
Phco9g00858 831 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Phco9g00858 831 Gene3D - 415 565 - -
Phco9g00858 831 FunFam Beta-galactosidase 290 415 - -
Phco9g00858 831 Pfam Galactose binding lectin domain 753 830 IPR000922 GO:0030246
Phco9g00858 831 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Phco9g00858 831 SUPERFAMILY Galactose-binding domain-like 579 744 IPR008979 -
Phco9g00858 831 FunFam Beta-galactosidase 587 727 - -
Phco9g00858 831 Gene3D - 743 831 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00858 Phco-Chr9 6649699 6655725 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00858 9 6649699 6655725 Phco9g00858 9 6649699 6655725 ECH