Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00840 ATGATGAAAAAGCAAAGAGTCTTGTCCTTCTCACTAGCAGTGCTACTTTCATCTTTGTTTTTCACCACCACTTTAGCCCAATTAGCACCAGCTGCTTCCCCTCTAAAACCACCCCCACCTATCCCTACACCACCAGCTGCATCCCCTAAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACCCCTGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCTAAGTCATTCAACATCCTTATCCGCCTTATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCCGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCCTACAGTTCCATGTTCTTTCTGACTATGTGTCTAGCTCCAACTTTGATACTCTAACCAACCCAGTGAGAACCCTTGCAGGGGCTAAACCTGGAAAAGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGGGAGGTTAACACCACTATCACAGGCATTATATACACAGATAAGCATCTTGCTATTTATAAGGTGGGAAAGGTGCTTCTTCCTATGGACTTTTTTGTTGTTGCTAAGGCACCTGCAAAGGCACCCTCTTTGGCACCAGAATCTTCAGCAAAGGCGCCTAAAGCAGATAAGGAGAAGTCAGTGTCTCCAGATTCCTCAGAATCATCTGAGATTAATGGCACACACAATACCTCTGCCACTGTGAAAATCAATCATGGAAAGTGGTTGTCACTTGTCCTTGGACCAATTCTCCTTATAATATTGTCATCATGA 873 0.4536 MMKKQRVLSFSLAVLLSSLFFTTTLAQLAPAASPLKPPPPIPTPPAASPKPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFVVAKAPAKAPSLAPESSAKAPKADKEKSVSPDSSESSEINGTHNTSATVKINHGKWLSLVLGPILLIILSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00840 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 256 IPR045003 -
Phco9g00840 290 Pfam Fasciclin domain 81 215 IPR000782 -
Phco9g00840 290 Gene3D FAS1 domain 54 215 IPR036378 -
Phco9g00840 290 MobiDBLite consensus disorder prediction 36 65 - -
Phco9g00840 290 MobiDBLite consensus disorder prediction 36 58 - -
Phco9g00840 290 FunFam Fasciclin-like arabinogalactan protein 11 55 215 - -
Phco9g00840 290 SUPERFAMILY FAS1 domain 64 216 IPR036378 -
Phco9g00840 290 MobiDBLite consensus disorder prediction 231 261 - -
Phco9g00840 290 SMART fasc_3 111 216 IPR000782 -
Phco9g00840 290 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00840 Phco-Chr9 6543836 6544708 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00840 9 6543836 6544708 Phco9g00840 9 6543836 6544708 ECH