Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00832 ATGCATAGGATCATCACCGCAAGGTCCATTTTTTCTGCTGTTTTCAGAAGCAAACCTCAACCTCACTCTGCTGCTTTTTCCACATCCTTGCTCTTCGACGAAACTCAGATACAGTTTAAAGAAAGTGTTTCTCAGTTTGCAACGGAAAATATTGCTCCTCATGCTTCAAAAATAGACCACACAAATTATTTCCCAAAGGAGGTGAACTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCTCCAGAGGAATATGGAGGGCTTGGTCTAGGTTACTTGTATCACTGTATAGCGATGGAAGAGATTAGCCGTGCTTCGGCATCCGTTGGTCTTTCTTATGGTGCTCATTCAAACTTGTGTGTCAATCAGCTGGTGAGGAATGGAAGCCCTGCTCAGAAAGAGAAATATTTACCTAAGCTTATTTCTGGGGATCACGTGGGAGCTTTGGCAATGAGTGAGCCCAATTCTGGGTCCGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGCTATGTACTTAATGGGAACAAGATGTGGTGTACTAATGGGCCAGTTGCTCAAACATTAGTTGTCTATGCTAAAACAGACATAGCTGCTGGGTCAAAAGGCATTACTGCATTTATCATCGAGAAGGGAATGTCTGGATTCAGTACTGCCCAGAAATTGGACAAACTTGGGATGCGAGGAAGTGATACATGTGAGCTTGTCTTTGAGAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGGAAAGAAGGGAAAGGAGTATATGTCATGATGTCTGGGCTGGATCTGGAGAGACTTGTTTTGGCAGCTGGCCCTCTGGGTATTATGCAGGCATGTCTTGATGTTGTTCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGTCGTCCTATCGGGGAGTTTCAGTTTATACAGGGGAAAACTGCTGACATGTATACTGCATTGCAGTCCTCAAGGTCTTATGTGTATTCTGTAGCTCGAGACTGTGACAATGGAAAGGTTGACCCAAAGGATTGTGCTGGAGCCATCCTTTGTGCAGCTGAAAGAGCAACCCAGGTTGCTTTGCAGGCTATACAGTGTTTAGGTGGGAATGGCTACGTGAATGAGTATCCTACTGGTCGTCTCCTGAGAGATGCCAAACTCTACGAGATTGGAGCAGGAACTAGTGAGATCAGAAGAATGATTATTGGACGTGAGCTCTTCAAGGAGCAATAA 1233 0.4444 MHRIITARSIFSAVFRSKPQPHSAAFSTSLLFDETQIQFKESVSQFATENIAPHASKIDHTNYFPKEVNLWKSMGEFNLLGITAPEEYGGLGLGYLYHCIAMEEISRASASVGLSYGAHSNLCVNQLVRNGSPAQKEKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVLNGNKMWCTNGPVAQTLVVYAKTDIAAGSKGITAFIIEKGMSGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPIGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGAILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00832 410 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 365 384 IPR006089 GO:0003995
Phco9g00832 410 PIRSF PIGM 28 126 - -
Phco9g00832 410 PIRSF PIGM 158 410 - -
Phco9g00832 410 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 25 148 - -
Phco9g00832 410 Gene3D - 263 406 - -
Phco9g00832 410 Gene3D - 150 262 IPR046373 GO:0016627
Phco9g00832 410 FunFam isovaleryl-CoA dehydrogenase, mitochondrial 264 408 - -
Phco9g00832 410 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 150 263 - -
Phco9g00832 410 Pfam Acyl-CoA dehydrogenase, N-terminal domain 34 147 IPR013786 GO:0016627|GO:0050660
Phco9g00832 410 PANTHER ACYL-COA DEHYDROGENASE 31 409 - -
Phco9g00832 410 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 256 408 IPR036250 GO:0016627
Phco9g00832 410 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 153 165 IPR006089 GO:0003995
Phco9g00832 410 Pfam Acyl-CoA dehydrogenase, middle domain 151 246 IPR006091 GO:0016627
Phco9g00832 410 Gene3D - 22 148 IPR037069 GO:0016627|GO:0050660
Phco9g00832 410 Pfam Acyl-CoA dehydrogenase, C-terminal domain 258 406 IPR009075 GO:0016627
Phco9g00832 410 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 26 269 IPR009100 GO:0016627
Phco9g00832 410 CDD IVD 32 408 IPR034183 GO:0003995
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00832 9 6452126 6458761 Phco9g00832 9 6452126 6458761 ECH