Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00827 ATGTTTTCTTTCTCAAGAAATTGCTTCAAATATTGTACTTCCTTCTTCAGGAGGAATGTTCCAAATGAAACCATACTCTCCACACTCTCATTTTGCCACAAATTTCAGGATTCCAATGAGAAAAATTTACACAAGATATGTTTTTCTAATCACACCCACAAATTTGACTGCTTTTTATTCCAAACCAACACTAGTTACACTCAATTTCCTGTCCCATTTGCACCCTTTAGTTCTCCCTATTCAACAAAGGCTCCTTCAAGATCTTACCGAAGGCGAGCCCGAAATAGGTTGTTGAAGTCCTCAAAGCCTACCCTGGACCAAGCCCAATTTCAGTTGGCACTGTCCCAACTTCCTCCAAGGTTTACTACGGAAGAACTCTGCTGTGTGATTGCTCAACAAGATCATCCCTTGGTTTGCTTAGAACTGTTTCACTGGGCATCTCAGCAGCCACGGTTTCAGCACGACGTGTCCACGTTTCATGTCACCATAAAGAACCTTGGTGCTGCAAAGATGTTCCAAGAAATGGATGACATCGTGAACCAACTGCTTGCAGTTCCTTTAATTGGTTCAGAGGCACTGTTCAACACGGTTATATATTATTTCACCCAGGCGCGGAAGCTGACTAGAGCTGTCAATGTGTTTAAGCACATGAAAAGTGGGAGGAATTTAGTTTCCTGTTATAGGCCTTCTATTAGAACCTATAATATTCTTTTTGCTGCATTTTTGGGTAGAGGAAGCAACTCCTATATAAACCATGTGTATATGGAAACAATTAGGTGTCTGTTTAGGCAAATGGTTAATGATGGGATCAAGCCTGATATTTTTTCATTGAATTCTATGATCAAAGGTTACGTGCTATCTCTTCATGTTAATGATGCATTGAGAATATTTCATCAGATGGGTGTGGTTTATGATTGCCAGCCCAATGCGTTGACATATGATTGCTTGGTTTACGGCTTGTGTGCCCAGGGCAGAACAAATAATGCCAAAGAATTATGTTATGAAATGAAGACCAAGGGTTTTGTTCCTGGTAGTAAATCTTATAATTCACTTGTCAACTCTTTGGCACTTGGTGGAGAGATTGAGGAAGCAGTAAATTATCTGTGGGAGATGACTGATAAGCAAAGGTCAGCTGATTTCATTACATATAGGACTGTACTGGATGAGATATGTAGACGTGGAACAATTCAGGAGGGCATGAGCTTTTTGCAGGAGTTACAAGAAAAGGACCTTGTAGATGGGCATGCTTACAGGAAGCTTCTATATGTGCTTGAAGATGACTATGGGGATTCAGTAAGTAGAAACATGGGAATTCAGTGA 1320 0.4045 MFSFSRNCFKYCTSFFRRNVPNETILSTLSFCHKFQDSNEKNLHKICFSNHTHKFDCFLFQTNTSYTQFPVPFAPFSSPYSTKAPSRSYRRRARNRLLKSSKPTLDQAQFQLALSQLPPRFTTEELCCVIAQQDHPLVCLELFHWASQQPRFQHDVSTFHVTIKNLGAAKMFQEMDDIVNQLLAVPLIGSEALFNTVIYYFTQARKLTRAVNVFKHMKSGRNLVSCYRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVNDGIKPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCQPNALTYDCLVYGLCAQGRTNNAKELCYEMKTKGFVPGSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYRTVLDEICRRGTIQEGMSFLQELQEKDLVDGHAYRKLLYVLEDDYGDSVSRNMGIQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00827 439 Gene3D Tetratricopeptide repeat domain 91 257 IPR011990 GO:0005515
Phco9g00827 439 PANTHER ATPASE EXPRESSION PROTEIN 3 33 422 - -
Phco9g00827 439 Gene3D Tetratricopeptide repeat domain 287 410 IPR011990 GO:0005515
Phco9g00827 439 Pfam PPR repeat 347 374 IPR002885 -
Phco9g00827 439 Pfam PPR repeat 194 219 IPR002885 -
Phco9g00827 439 NCBIfam pentatricopeptide repeat 276 310 IPR002885 -
Phco9g00827 439 NCBIfam pentatricopeptide repeat 312 344 IPR002885 -
Phco9g00827 439 Pfam PPR repeat family 272 321 IPR002885 -
Phco9g00827 439 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 309 343 IPR002885 -
Phco9g00827 439 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 379 413 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00827 Phco-Chr9 6388798 6390117 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00827 9 6388798 6390117 Phco9g00827 9 6388798 6390117 ECH