Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00813 ATGGCAGCGTCGCGAATCGTAGCCCATCCTCCGCCCTATCTCCACCGCCAATGTCCGCCGTCAGACACCGTGCTGTTCCTCAACCTAACGCGTCACGCAAAACGGTACCGTAACCTCAGCATTTGCGCCTCTCTTCACGAGGGGAAACAGAAGAAGAACGATCTCGCCGATAAACCTCACTCAGTCGAATTGCGAACCAGCCCCGACGACGTCGTTTCCCGCGATCCGATTGTTCTTCCACGGCCTTTATCTGCTTCAGTCTCCGACGGTTCAGGCCTTCGTGTGGCATATCAGGGGGTTCATGGTGCTTACAGTGAATCGGCAGCACATAAAGCCTACCCAAATTGTGAAGCTGTGCCGTGTGAACAATTTGAAACCACTTTTGATGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGTATCCACAGAAATTATGACCTTTTACTCCGGCATAGTTTACATATAGTGGGAGAAGTAAAATATGCTGTCCGTCATTGTTTGATGGCCAACCATGGTGTTAAACTTGAGGATTTGAACCGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGCGAGAACACACTGACAAAACTGGGATTGGTACGAGAAGCAGTTGATGATACAGCTGGTGCCGCTAAGCATGTTGCCTTGCTCGGACTACAAGATGCAGGAGCAGTTGCCAGTTCTTCTGCTGCAGAGATATATGGCTTGAATATACTTGCTGAAGACATTCAGGATGATAGTGATAATGTCACTCGATTTTTGATGTTAGCACGAGAACCTATAATTCCAGGAACTGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAGGGTCCTGGGGTTCTTTTCAAGGCCCTTGCTGTTTTTGCTTTGCGCCAGGTTAACCTTACAAAGATTGAAAGCCGTCCTCTGCGAAACCAACCTCTACGAGCATCAGATGATAGCAGCAATTCGAAGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTAATCAGAATGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTAGGGAGTTATCCAGTGGACACTAGCTCGACGACTGCCGAATAG 1146 0.4686 MAASRIVAHPPPYLHRQCPPSDTVLFLNLTRHAKRYRNLSICASLHEGKQKKNDLADKPHSVELRTSPDDVVSRDPIVLPRPLSASVSDGSGLRVAYQGVHGAYSESAAHKAYPNCEAVPCEQFETTFDAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKYAVRHCLMANHGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKHVALLGLQDAGAVASSSAAEIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQVNLTKIESRPLRNQPLRASDDSSNSKYFDYLFYVDFEASMANQNAQNALRHLKEFATFLRVLGSYPVDTSSTTAE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00813 381 ProSiteProfiles Prephenate dehydratase domain profile. 94 269 IPR001086 GO:0004664|GO:0009094
Phco9g00813 381 ProSiteProfiles ACT domain profile. 283 372 IPR002912 -
Phco9g00813 381 CDD PBP2_Ct-PDT_like 94 271 - -
Phco9g00813 381 Gene3D - 276 375 - -
Phco9g00813 381 SUPERFAMILY Periplasmic binding protein-like II 94 275 - -
Phco9g00813 381 CDD ACT_CM-PDT 281 372 - -
Phco9g00813 381 ProSitePatterns Prephenate dehydratase signature 2. 309 316 IPR018528 GO:0004664|GO:0009094
Phco9g00813 381 Pfam Prephenate dehydratase 95 271 IPR001086 GO:0004664|GO:0009094
Phco9g00813 381 ProSitePatterns Prephenate dehydratase signature 1. 245 267 IPR018528 GO:0004664|GO:0009094
Phco9g00813 381 Gene3D - 178 257 - -
Phco9g00813 381 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 33 379 - -
Phco9g00813 381 SUPERFAMILY ACT-like 264 373 IPR045865 -
Phco9g00813 381 FunFam Arogenate dehydratase 89 176 - -
Phco9g00813 381 FunFam Arogenate dehydratase 276 375 - -
Phco9g00813 381 FunFam Arogenate dehydratase 177 257 - -
Phco9g00813 381 Gene3D - 89 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00813 Phco-Chr9 6224693 6229475 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00813 9 6224693 6229475 Phco9g00813 9 6224693 6229475 ECH