Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00785 ATGCCTCGCGCCATGGCGATGTCCGTGTGCCTCTCGCGCCCCGGCGATGCCCGCATGCCTCACGCCTTGGCGATCAAGATGTCTGGGCGTGGAAAGGGAGGTAAGGGTTTGGGAAAGGGAGGAGCCAAACGGCACCGTAAGGTGTTGCGCGACAACATCCAGGGAATAACGAAGCCTGCCATTCGGCGTTTGGCGCGTAGGGGTGGCGTGAAGCGTATCAGTGGTCTCATCTACGAAGAGACTCGCGGCGTTCTCAAGATCTTTCTTGAGAACGTGATTCGCGACGCCGTTACTTACACTGAGCACGCAAGGAGAAAGACCGTTACGGCAATGGATGTGGTCTATGCACTCAAGAGACAGGGAAGAACCCTGTACGGATTTGGGGGCTAG 390 0.5744 MPRAMAMSVCLSRPGDARMPHALAIKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 129
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00785 129 Pfam Centromere kinetochore component CENP-T histone fold 65 122 IPR035425 -
Phco9g00785 129 PRINTS Histone H4 signature 103 115 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 PRINTS Histone H4 signature 66 86 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 PRINTS Histone H4 signature 46 65 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 PRINTS Histone H4 signature 115 126 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 PRINTS Histone H4 signature 31 42 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 PRINTS Histone H4 signature 88 102 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 Gene3D Histone, subunit A 28 129 IPR009072 GO:0046982
Phco9g00785 129 PANTHER HISTONE H4 27 128 - -
Phco9g00785 129 CDD H4 44 127 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 ProSitePatterns Histone H4 signature. 41 45 IPR019809 GO:0000786|GO:0003677
Phco9g00785 129 SMART h44 42 116 IPR001951 GO:0003677|GO:0030527
Phco9g00785 129 FunFam Histone H4 28 129 - -
Phco9g00785 129 SUPERFAMILY Histone-fold 29 128 IPR009072 GO:0046982
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco9g00785 Phco-Chr9 5893264 5897136 Dispersed/Proximal
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01579 10 38606213 38606524 Phco9g00785 9 5893264 5897136 PCT