Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00781 ATGTTTTCCCCACCTCTTATTGCAACAGAAATCACCAAAAATTTCACTTTACTTTTACATGATGATTCCAATTTTCATGAACATATACATGATTTGTGGTCACTACAAATACAAAGCGAAGAACATTTCAGTGATCTTCCGAAGGGGCGAAAGAGAAACGCATTCGGCATTCGGAGTGTGAGTGAAGATCGAACCATGGACGACGAACTGCTCGAGCTGCAGCGACAATTCGAGTTCGCGCAGCAAGCCAAGTCGAGCATTCGATTATCGGAGCGAAACGTCGTCGAATTGGTCCAAAAACTGCAGCACCTCCAAATTATCGATTTCGAACTTCTCCACACTGTCTCCGGCAAAGAGTACATCACTCTAGATCAACTGAGGAATGAGATGGTGGAGGAGGTGAAGAGATTAGGGCGGGTTTCTTTGATCGATCTGGCTGACGTTACTGGAGTTGACTTGTACTACGTGGAGAAGCAGGCACAAAGCGTTGTAACGGCACACAGAGAACTCATGTTGACTCAGGGAGAAATCATGTCTGGCTCTTATTGGGACTCAATCGCGGAAGAGATTAACGAGAGGCTTCAGGAGTGCAGTCAGATTGCACTGACGGAAATCGCGGCGCAATTGAACGTCGGCTTGGACTTGGTTGCCTCCGTGTTGGAGCCGCGCCTTGGAACGATTGTGAAAGGAAGGCTTGAAGGTGGCCAGCTGTACACTCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTTCGGGGCGCTGTGCGGGGCACCACTGTTCCGACCAATTTGACTGCGGTATGGAGTTTGTTGCAGCAGTTGCTGCAAGAAATTGACGGAACCAGCGGCTTGGCTGTTGAAGGATCTTTCTTCCAGTCATTGTTTAACGGACTAGTGAAGGAAGGGGAGATTCTAGGGTCACTTCGTGCAGGAGTACATTGGACACCAGCTGTATTTGCCATTGCTCAAAGGGAGTTTGTGGAGTCATTCTTTTCTCAGAATTCTTTTATCACCTATGAGGCGCTGCACAAACTTGGAATTCCCCAGCCAATTCAATTTTTGCAGTCCAGATACCCTGAAGGAAAACCTTTAGTTACAACATTTGTTCACCCATCTGTGATTGAGATGCTAGATGCTGCAACTGAGGACGCCATCGACCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTACCTTCATCTCTTACACCTCAAGATGCTTCTCGAATGTTGTCCTTCTGTCAATCTGTGCAAAATGCTCTTAAGTCTAACAAAGCACACATTTTTGGGGATTTTTATGTGCTGAGCAGCAGTTTTATAAAGGACATCTCTGATCGTGTTGTGAAAGAGTTGGAGATATTAGGTGTTTCAAGATCTGCTGGCACTACGATGCCTGGTGATGTTAAAGTACCCAATGAAGCTAAAGTAGGGCGCGAGTCGAGCAGGTTGAATGAGTCCAATGAGATGGCAAGTGATGGTGGTGCCAACAGGCAAGCTGATAAAGGATCAAAGAAGAAAAAGGGGAAAGTCACAGGGAATGCAGTAGTAAATATATCTGAAAGTGGTGCAGATAACCAGGAACAGACATTAACAAAATCTAAGAGAGGCCAGAAAAAAGGTAAGGATACATCTGCACAAACGGCTGATTCGAAGACAGGTTCTAGGAAAGAATTGCTTAAAATAAAAGAGGAAGATCTCAGTCCCTCAGAAGAATGGATTATGCAGAAAATTACAGCATTGGTTTCTGATTTTGAAGAACAAGGTATAGATGATCCTGAGATAATTCTCAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAGTTCTTGGATGGAGAAAAAGAAGTCACTGCTTACAAACAATGCAGACAGAATGAAACGTTTGCTTGATAATTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCGGTTGTTTTGCATAGGCATTTACTAAGAACAATAGCAGCTCCTATGGTGGATTTGCTTCTTCGTAACCTGGATGAGCACAACAAATTAAAGAATGGACTCGATGTGCAGGAAGCTCCAAATTCTGAATTTGTTTCACTTAGTCCTGCAGACAGAACTGCAATTTCTAAGAGTTTTCCAGGAGCTCTTGCAAACAAGGCTCTTGCTGTTGTTGAATCATTGGAAGGAAAGAGTGTGGAGACATTCATGGCTGCGTTTAGAATGATTACCGAAGAGAGTGGGCTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTCTTACATTCATATCGTAAGGAATTGACATCTCAAGTTTCTGCTGAGACTGACCCTGTATCACTTCTAGCAAAAGTTGTTTCTTTACTTTATATCCAGGTTTACCACAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCCGTTGCCATTTCTCATTTAAGGGACAAGGTAGACGAGTCGGCATGCAAGATTTTAACTGATTATCAAACTGCCACAGTCACTCTTTTGACACTGTTGGCAGCTTCACCCGGTGACGATGAGGATTGTGCATCTGATAGGATTTTGAGTAAAAGGGTGCTTCTAGAGAGCCAAATGCAGGACCTCAAAAGCTTGGTTTTGAGCACGACCCAATCTTCATAA 2655 0.4384 MFSPPLIATEITKNFTLLLHDDSNFHEHIHDLWSLQIQSEEHFSDLPKGRKRNAFGIRSVSEDRTMDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQHLQIIDFELLHTVSGKEYITLDQLRNEMVEEVKRLGRVSLIDLADVTGVDLYYVEKQAQSVVTAHRELMLTQGEIMSGSYWDSIAEEINERLQECSQIALTEIAAQLNVGLDLVASVLEPRLGTIVKGRLEGGQLYTPAYVARVGAMVRGAVRGTTVPTNLTAVWSLLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGEILGSLRAGVHWTPAVFAIAQREFVESFFSQNSFITYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSVIEMLDAATEDAIDRGSWSDSLSLLPSSLTPQDASRMLSFCQSVQNALKSNKAHIFGDFYVLSSSFIKDISDRVVKELEILGVSRSAGTTMPGDVKVPNEAKVGRESSRLNESNEMASDGGANRQADKGSKKKKGKVTGNAVVNISESGADNQEQTLTKSKRGQKKGKDTSAQTADSKTGSRKELLKIKEEDLSPSEEWIMQKITALVSDFEEQGIDDPEIILRPLANQLRPTIISSWMEKKKSLLTNNADRMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTIAAPMVDLLLRNLDEHNKLKNGLDVQEAPNSEFVSLSPADRTAISKSFPGALANKALAVVESLEGKSVETFMAAFRMITEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLAKVVSLLYIQVYHKALQAPGRAISVAISHLRDKVDESACKILTDYQTATVTLLTLLAASPGDDEDCASDRILSKRVLLESQMQDLKSLVLSTTQSS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00781 884 MobiDBLite consensus disorder prediction 458 559 - -
Phco9g00781 884 MobiDBLite consensus disorder prediction 529 543 - -
Phco9g00781 884 Coils Coil 614 648 - -
Phco9g00781 884 MobiDBLite consensus disorder prediction 512 528 - -
Phco9g00781 884 Pfam E3 UFM1-protein ligase 1 69 353 IPR018611 GO:0061666|GO:0071569
Phco9g00781 884 PANTHER E3 UFM1-PROTEIN LIGASE 1 66 883 IPR018611 GO:0061666|GO:0071569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00781 9 5826627 5838387 Phco9g00781 9 5826627 5838387 ECH