Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00755 ATGTCGGTGACTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTTCAAGTCCCGAAGAAATGGACTGACAGAGAAACCAGTCCAGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAAACGGCCAGAAAGGTCTCCGTCGTTTACTACCTCTCCCGAAATGGCCAACTCGAACACCCTCATTTCATGGAGGTTCCTCTCTCTTCACCTCAAGGACTTTACCTCAAAGACGTAATCAACCGCTTGAACGTTCTCCGAGGAAAATCCATGCCCACCATGTACTCTTGGTCCTCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCACGATTTGTCGGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGTTCGGAGATTGTTGAGCACACTGTCGCCGGCGGTGCGAGGGCTAACAAATCAGAGGAGGAGTCCGGTTCGCCTGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAATCCGAATCGTTCGGTGACTCAGCTGGGAGAATCGGCGCCGACGCGGCCACTCAGACGGAGGAGAAGCGGAGGCGAAGAAGGGCGGCGAGGGAGGAAGAGGCGGAAGATATTCAAGAGAAGAATGATGGAATTGACGCGGGAATGGATGGGGAGAGGGTGCCGCACGTGACTTGTGATAATAACATTAATCATACTACGGAGCTGAGCAGGGATGAGATCTCGCCTCCACCGTCGGATTCGAGCCCCGAGACGCTGGAGACGCTGATGAAAGCAGATGGACGGCTCGGATTGCGGTCTTCGGAATCGGAGAAGGGGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCGTCGTCGGTTTTGTTGCAGTTGTTATCGTGCGGCGCTGTGTCTTTTAAGGAGTGTGGGGCTAACGCAGCGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGTGGAGCAGGGAATCAAGTTGGAAAAGATACAGGGATATCGATGGAAATTCCGGATTTGAGCAGGCTAAGGTTGGAAGATAAAGAATATTTTAGTGGGAGCTTGATCGAAACCAAGAAAGTGGAAACCCTTGCTTTGAAGAGGTCTTCTTCTTACAATGCAGATAGCGGTTCCCGGTTACAAATAGTGGAGCATGAAGGAGAAGTGGTGCGGGCAAAGTGCATACCAAGAAAATCTAAGACACTACCAACTAAGAAAGAAGAGGGTACTTCCATGCATATTACTACCGGAGGTCAACACGGGAGCAAAAGATTTGACGCACAACAATAA 1332 0.515 MSVTSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPQGLYLKDVINRLNVLRGKSMPTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHTVAGGARANKSEEESGSPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGRIGADAATQTEEKRRRRRAAREEEAEDIQEKNDGIDAGMDGERVPHVTCDNNINHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKGNLTVESCPSGRMRASSVLLQLLSCGAVSFKECGANAAKDQGFSLVGHYKSRMPRGAGNQVGKDTGISMEIPDLSRLRLEDKEYFSGSLIETKKVETLALKRSSSYNADSGSRLQIVEHEGEVVRAKCIPRKSKTLPTKKEEGTSMHITTGGQHGSKRFDAQQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00755 443 PIRSF UCP031043 12 431 IPR021182 -
Phco9g00755 443 MobiDBLite consensus disorder prediction 138 157 - -
Phco9g00755 443 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 24 428 IPR010369 -
Phco9g00755 443 MobiDBLite consensus disorder prediction 414 443 - -
Phco9g00755 443 MobiDBLite consensus disorder prediction 1 29 - -
Phco9g00755 443 MobiDBLite consensus disorder prediction 192 225 - -
Phco9g00755 443 MobiDBLite consensus disorder prediction 422 443 - -
Phco9g00755 443 MobiDBLite consensus disorder prediction 241 260 - -
Phco9g00755 443 MobiDBLite consensus disorder prediction 183 225 - -
Phco9g00755 443 Pfam Protein SOSEKI, plant 45 390 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00755 Phco-Chr9 5588341 5591647 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00755 9 5588341 5591647 Phco9g00755 9 5588341 5591647 ECH