Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00748 ATGTACCTCTGGCAAACGAAGTGTGCTTTCAGGGGAAATGGTTTGGTGAGCACAAGTTCTGCACTAGTTATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCGGTAGAGGAGAAGAAGTCGACGGTGGGAGACAAGGCTCCGGCGGAGAAGAAGCCGAAGGCAGGAAAGAAGCTTCCGAAGGAGGGAGGAGCTGGTGGTGATAAGAAGAAGAAGAGAAACAAGAAGAATGTGGAGACATACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCTGACATTGGAATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACTTCAAGGGAAATCCAGACGGCGGTCAGACTTGTGCTGCCCGGAGAATTGGCCAAACATGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGTTCTTGA 513 0.501 MYLWQTKCAFRGNGLVSTSSALVMAPKAEKKPAEKKPVEEKKSTVGDKAPAEKKPKAGKKLPKEGGAGGDKKKKRNKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00748 170 FunFam Histone H2B 22 170 - -
Phco9g00748 170 Gene3D Histone, subunit A 46 170 IPR009072 GO:0046982
Phco9g00748 170 SMART h2b3 73 169 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 MobiDBLite consensus disorder prediction 21 76 - -
Phco9g00748 170 ProSitePatterns Histone H2B signature. 138 160 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 PRINTS Histone H2B signature 83 101 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 PRINTS Histone H2B signature 141 154 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 PRINTS Histone H2B signature 154 167 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 PRINTS Histone H2B signature 102 122 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 PRINTS Histone H2B signature 124 141 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 MobiDBLite consensus disorder prediction 28 76 - -
Phco9g00748 170 Pfam Core histone H2A/H2B/H3/H4 27 146 IPR007125 GO:0003677
Phco9g00748 170 PANTHER HISTONE H2B 44 169 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco9g00748 170 SUPERFAMILY Histone-fold 62 170 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00748 Phco-Chr9 5548480 5550892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00748 9 5548480 5550892 Phco9g00748 9 5548480 5550892 ECH