Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00706 ATGAGTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGCTTTTCAGAATATGTTCCTGAAAGAACCTTGATGCGAGTTCATCCAGCTCGGCCAGTTAATGGCAATTCTCTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTAAACTCCCCTCAGATGTTACATCATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTAATGGCTACAAGTCTAAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCACACTGAACTCCGTCTTCACATGCCACCATCGATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTGGACACTGATACTGCTCCTAGTACTCGTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAAGATGGCTCAGCTGCTCTGGCATCCTCTTCAGGTGCAGCTGAGATTAAGCAAGAATCTGGAGGAACAGAGGCTGGTATCGGAGGTCCAGAAGATGAGCTGACATGTACTATATGCCTGGACCAAGTTAAGAGGGGGGAGCTTGTTCGTAGCTTACCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAACAAGGAACATGTCCTGTGTGCAAATTAAGGATAGGGTCGGGAAGTGGGGGAAGCAGGGAGAGCGAATCCGATGGTTCAGATATTGCGTAA 825 0.4594 MSFVFRGSRGDIESGFSEYVPERTLMRVHPARPVNGNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTAPSTRSMTEEEINALPIHTYKVPVPPKDGSAALASSSGAAEIKQESGGTEAGIGGPEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSGSGGSRESESDGSDIA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00706 274 CDD RING-H2_PA-TM-RING 211 253 - -
Phco9g00706 274 PANTHER TARGET OF ERK KINASE MPK-1 1 258 - -
Phco9g00706 274 SMART ring_2 212 252 IPR001841 -
Phco9g00706 274 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Phco9g00706 274 MobiDBLite consensus disorder prediction 178 204 - -
Phco9g00706 274 SUPERFAMILY RING/U-box 207 257 - -
Phco9g00706 274 Pfam Ring finger domain 211 253 IPR001841 -
Phco9g00706 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 259 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00706 Phco-Chr9 5207812 5210708 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00706 9 5207812 5210708 Phco9g00706 9 5207812 5210708 ECH