Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00688 ATGGAAAACGGGAAAGCCCCTATCTTGGTGGAAGAGAGGATAATGCCGAAAATTGATAGTCCCCTTGCCTCTGAAACACTTGATGTTCTTCGTATGAAGGCAGAGTTATCTTGCAGTTCTGGCTGTCCTTTTTCTGGACATGAAAATAGTGTTGTGACATCAAACGAGTCTTCAAAGTCGGCAAAGAAACTTTCTGGACTTATTGTTTTCTATGCTATTGTCATGGTTGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATCAGTGATGCAGCACACTTGCTTTCTGATATTACAGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAGGCAACACCACATCAATCTTTCGGATACAGTCGTCTCGAGGTTTTGGGGGCTCTTATATCGGTGCAGTTAATTTGGTTGATAGCTGGTTATTTGATATATGAAACAATTGGTAGAATTCTTGTACAAAATACCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAACACTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGTCATGATCATGGTCATGGTCATCATTATCATGGTTATGGTCATGATCATAGTCATCATCATCATGGTCATGGTCATGATCATAGTCATCATCAATGCCAGACAGATCATGATCATGGGAATAAGGAGCTATCTATAATAAGTGATGAGGAGAATGTTACTCTGGTTTCAAGTAGTCACAGAAATACTAATGTCTTGAACATAAATCTTCAGGGGGCGTATTTGCATGTCATGGCTGATATGATTCAATCTGTTGGAGTGATGATAGCTGGAGCCATAATATGGGCTGAACCTAAGTGGTTTATAGTTGACCTTGTGTGCACTCTTATATTCTCTGTTTTATCTTTAAGTACTACCCTGCCCATGCTTAGGAATATTTATGGCATTCTCATGGAAAGGACACCAAGTGAGATAGATATTAGCAAGCTGGGAAGTGGCATTAGAAATATCAAGGGAGTACGGGATGTTCATGACTTGCACGTTTGGGCTATAACTGTTGGAAAACTTGTTCTTTCTTGCCATGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCACTATTAAACATTACTGTGAAAAAACATATCAAATACAGCATGTAACCATACAAATTGAGTAA 1185 0.3983 MENGKAPILVEERIMPKIDSPLASETLDVLRMKAELSCSSGCPFSGHENSVVTSNESSKSAKKLSGLIVFYAIVMVVELIGGIKAHSLAVISDAAHLLSDITGFSISLFAVWASGWEATPHQSFGYSRLEVLGALISVQLIWLIAGYLIYETIGRILVQNTSVNGKLMLAIATLGFVLNFIMVAWIGHDHGHGHHYHGYGHDHSHHHHGHGHDHSHHQCQTDHDHGNKELSIISDEENVTLVSSSHRNTNVLNINLQGAYLHVMADMIQSVGVMIAGAIIWAEPKWFIVDLVCTLIFSVLSLSTTLPMLRNIYGILMERTPSEIDISKLGSGIRNIKGVRDVHDLHVWAITVGKLVLSCHVVAEPGISSIDLLGTIKHYCEKTYQIQHVTIQIE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00688 394 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 321 394 IPR036837 -
Phco9g00688 394 Gene3D Cation efflux protein transmembrane domain 61 316 IPR027469 -
Phco9g00688 394 Pfam Cation efflux family 68 317 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phco9g00688 394 NCBIfam cation diffusion facilitator family transporter 64 394 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phco9g00688 394 MobiDBLite consensus disorder prediction 201 226 - -
Phco9g00688 394 SUPERFAMILY Cation efflux protein transmembrane domain-like 62 318 IPR027469 -
Phco9g00688 394 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 42 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00688 Phco-Chr9 5107000 5108184 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00688 9 5107000 5108184 Phco9g00688 9 5107000 5108184 ECH