Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00683 ATGGCTGGTCGTTCCTTCTCAAAAGTTTGGAAAATCTGTGATTTTGGTTCTTTATTACTGCCACACTTCACCACAACCACCAAACTTATCAAACACGCTTCACCTCCATTCTCCTTCCTTCAATCTAGTTCATTCAAAACGCCCTCGTCTTGGAGGCTATACCACGACGGAAGGCCCAGAGGCCCCCTTTGGAAGGGAAAGAAGCTCATTGGCAAAGAAGCGCTCTTTGTTGTATTGGGCTTGAAGAGGTTTAAGGATGACCAGGATAAGCTTCAAAAGTTCATCAAATCTCACGTTCTCAGACTCCTGAAGATGGACATGATCGCCGTTCTCACTGAACTTGAGCGTCAAGAACAAGTTTCTCTCGCTCTCATGATGTTTAAGGTTATGCAAAAGCAAGATTGGTACAAACCTGATACATACCTCTATAAAGATTTAATCATTGCATTGGCAAGGTCCAAAAAAATGGACGAAGTATCGTACTTGTGGGAAAGCATGCGAAAGGAAAATCTGTTCCCTGATTCTCAGACTTACACTGAAGTCATAAGGGGCTTCTTGAACTATGGATCTCCTGCGGATGCGATGAACATATATGAGGACATGAAGAATTCTCCGGATCCACCTGACGAGTTGCCATTCAGAATTTTGTTGAAAGGACTCCTGCCACATCCTCTTTTGAGAAACAAAGTGAAACAAGACTTTGAGGAGATTTTTCCTGATTCAAGTATCTATGATCCGCCACAAGAGATATTTGGCGCCCGCTGA 765 0.4327 MAGRSFSKVWKICDFGSLLLPHFTTTTKLIKHASPPFSFLQSSSFKTPSSWRLYHDGRPRGPLWKGKKLIGKEALFVVLGLKRFKDDQDKLQKFIKSHVLRLLKMDMIAVLTELERQEQVSLALMMFKVMQKQDWYKPDTYLYKDLIIALARSKKMDEVSYLWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEEIFPDSSIYDPPQEIFGAR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00683 254 Gene3D Tetratricopeptide repeat domain 68 254 IPR011990 GO:0005515
Phco9g00683 254 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Phco9g00683 254 Pfam PPR repeat family 138 185 IPR002885 -
Phco9g00683 254 PANTHER PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTIC 40 253 IPR044795 -
Phco9g00683 254 NCBIfam pentatricopeptide repeat 143 174 IPR002885 -
Phco9g00683 254 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 139 173 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00683 Phco-Chr9 5091421 5092615 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00683 9 5091421 5092615 Phco9g00683 9 5091421 5092615 ECH