Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00674 ATGGCCTCTGTAGCACTCACCACCACCCTCCCCTCTCTCCGCCTCCGCCGCAGCACCACCACCGCCGTGGCCCTCAAACCCAGTCGTCTTACTTCCTTTCCACCTTCCTCACTCAAACCAAACCTAACTACTTCGATTTCCTCCATCCCAAATTTCTCACTAAAAAAAACAAACCTCGTTTTCAATCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGTAGCTCCCATCACTCCGGCGCCGGCACCGGCTCCGGCTCCGGCTCCGGTTCAGCCATGGCAAGGCGCTTCAATAAAACCCCTATTAGCCTCCATCGCCACGGGAGTGATACTCTGGTTCACACCAGTTCCCGCGGGCGTGAACCGTAACGCGTGGCAATTACTCGCGATCTTCTTAGGCACAATCGTCGGCATTATAACCCAACCGTTGCCCCTCGGCGCGGTAGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTACCGTTCGCCGCGGCGTTCTCCGGCTTTGGTGACCCGATCCCCTGGCTCATCGCACTCGCCTTCTTCTTCGCCAAGGGATTCATCAAAACTGGGCTCGGGAACCGTGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCCCTCGGGTTAGGTTACAGCCTCGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATTCCCTCGGTGTCGGCGAGAGCTGGCGGGATATTCCTCCCGCTCGTGAAGGCGCTGTGCGTGGCGTGCGGGAGCAACGTCGGCGACGGGACGGAGACCAAGTTGGGAGCGTGGCTCATGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTGACGGCTATGGCGGCGAATCCACTCTGCGCGACGCTGACGCTAAATTCCATTAACCAGACGATTGGGTGGTTGGATTGGGCCAAAGCTGCAATTGTCCCTGGCTTGGCGTCGTTGGTGTTGGTTCCGTTGATTTTGTATGTTATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCGAAGCTTGCGAGAGAGAAGTTGGAGACAATGGGGCCCATGACAACCAATGAGAAGATCATGACTGCTACTCTGTTTCTCACGGTAGGACTCTGGGTATTTGGAGGACTTCTTAATGTTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGGGTTGTTACATGGAAGGAGTGCTTAGCGGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACGGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTAGTCCTTCTCTACTTTTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGCGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCCCCTTTCTTCGGAGCCATAGTGCTGTCGTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTACGGAATTGGATCAGCTCCTGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTGTAATCTGGCTTGGACTCGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1692 0.5266 MASVALTTTLPSLRLRRSTTTAVALKPSRLTSFPPSSLKPNLTTSISSIPNFSLKKTNLVFNRKHSSLTVRATVAPITPAPAPAPAPAPVQPWQGASIKPLLASIATGVILWFTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNVGDGTETKLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKSSPDAPKLAREKLETMGPMTTNEKIMTATLFLTVGLWVFGGLLNVDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKFIGLW 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00674 563 Pfam Sodium:sulfate symporter transmembrane region 98 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
Phco9g00674 563 NCBIfam DASS family sodium-coupled anion symporter 115 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
Phco9g00674 563 CDD ArsB_NhaD_permease 135 557 - -
Phco9g00674 563 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 69 563 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00674 Phco-Chr9 5015425 5018465 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00674 9 5015425 5018465 Phco9g00674 9 5015425 5018465 ECH