Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00672 ATGCGCAAGGTGAAGTACACTCAGCAGAATTTTTACGATAAGCTCTCTACCATAATTGATGAGTTCCCCCGGCTTGATGATATTCATCCTTTCTATGGGGATCTCCTCCATGTGCTCTACAACAAAGATCATTACAAGCTTGCACTTGGACAAATCAACACTGCTAGGAATCTTATTGGTAAGATTGCCAAAGACTATGTGAAATTGCTGAAGTATGGTGACTCACTGTATCGGTGCAAGTGTCTTAAGGTGGCTGCTCTTGGCCGCATGTGCACTGTGATTAAGAGGATTGGCCCGAGTTTGGCTTATCTAGAGCAGGTCAGACAGCACATGGCTAGGCTCCCTTCTATTGATCCTAATACAAGGACTGTCTTGATCTGTGGATATCCAAATGTTGGCAAGAGCTCGTTCATTAACAAAATTACAAGAGCTGATGTCGATGTCCAGCCCTATGCTTTCACTACAAAGTCTCTCTTTGTAGGTCACACAGATTATAAATACCTGAGGTACCAAGTAATTGATACACCAGGGATTCTGGACAGGCCGTTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTAGCACATTTGAGAGCGGCAATATTGTTTTTCTTGGACATTTCTGGGTCTTGTGGTTACAGTATTGCTCAGCAGGCAGCTCTGTTTCACAGCATTAAGTCCTTGTTTATGAACAAGCCACTGATCATAGTTTGCAACAAGACTGACTTGCAACCACTGGATGGGTTATCCGAGGAAGATATGAAGTTGGTCATGGAGATGAAAGCTGAAGCTATGAAGACTATAGTTGGTCAAGGAGGTGAGGCAACAAATGAAGACAGTGTATTGTTGACCATGAGCACTTTGACAGAAGAAGGGGTAATTGCTGTAAAAAACGCAGCATGTGACAGGTTATTGAATCAGAGGGTAGAAATAAAGATGAAATCAAAGAAAATGAATGACTGCTTGAATAGGTTTCATGTTGCAGTACCAAAGCCTCGTGACCAGAAGGAAAGACCATCATGTATTCCTGCAGCAGTTTTAGAAGCTAAAGCCAAGGAAGCAGCTGAGAAGGAAAAGAGAAAAACTGAAAAGGAACTGGAGGATGAGAATGGTGGGGCTGGTGTATACTCAATGAATTTGAGAAAGAATTACATTTTAGCCAATGATGAATGGAAAGAGGATGTACTGCCGGAAATCTTGGATGGACACAATGTTTATGATTTCATTGATCCTGATATTCTGCATAGGGTTGAAGAGTTGGAAAGAGAAGAAGGGATGAGAGAGGCAGAAGTTGAGGATGATGATTTTGAGATTGATGGAACTGAGTTGACCCCTGAACAGCAAGAAGCTTTAGCTGAGATTAGGAAAAAGAAAAGCTTGCTCATCCAGCAGCACAGGATTAAAAAGAGCAATGCGGAGAACAGGCCAACTGTTCCTAGGAAGTTTGACAAGGACAAACAGTTCACATCAGAGAGAATGGGAAGACAGCTGTCATCTTTGGGGCTTGATCCCACTTTGGCTATTAAGAGAATGCGCAGCAGATCTGTCTCTACTAGAGGACGGAAAAGGGATAGATCACCCGAAAGAAGTGCTGATGGCCAAGATGGTATGGATATTGATGGTGATACACCTAGCAAAAAACAGCGACTGAGTAGATCACTGTCACGGTCTAGGTCAATGTCACGCCCACCACATGAAGTTGTGCCTGGTGAAGGCTTAAGGGATTCTGCTCAAAAGATCAAGGCAATTAAACTTGCAAAGAAATCTGTCAAGAAGAGAAACAAGGATGCCCGTCACGATAGGACAGGCGATGCAGTTTTCTGCAATTTAAAGGCATTTGTTGGCATTCTTCCGCAGTTGCCTAAAGTTTTGTTATTTCGTTTAGTGGTTTTTGTTGGAGTGTAA 1914 0.4258 MRKVKYTQQNFYDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDLQPLDGLSEEDMKLVMEMKAEAMKTIVGQGGEATNEDSVLLTMSTLTEEGVIAVKNAACDRLLNQRVEIKMKSKKMNDCLNRFHVAVPKPRDQKERPSCIPAAVLEAKAKEAAEKEKRKTEKELEDENGGAGVYSMNLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILHRVEELEREEGMREAEVEDDDFEIDGTELTPEQQEALAEIRKKKSLLIQQHRIKKSNAENRPTVPRKFDKDKQFTSERMGRQLSSLGLDPTLAIKRMRSRSVSTRGRKRDRSPERSADGQDGMDIDGDTPSKKQRLSRSLSRSRSMSRPPHEVVPGEGLRDSAQKIKAIKLAKKSVKKRNKDARHDRTGDAVFCNLKAFVGILPQLPKVLLFRLVVFVGV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00672 637 PIRSF NOG1 1 612 IPR024926 -
Phco9g00672 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 265 IPR027417 -
Phco9g00672 637 Pfam NOG1 N-terminal helical domain 1 118 IPR041623 -
Phco9g00672 637 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 462 - -
Phco9g00672 637 CDD NOG 122 308 - -
Phco9g00672 637 MobiDBLite consensus disorder prediction 471 494 - -
Phco9g00672 637 Coils Coil 347 375 - -
Phco9g00672 637 Gene3D - 115 327 IPR027417 -
Phco9g00672 637 MobiDBLite consensus disorder prediction 468 577 - -
Phco9g00672 637 PRINTS GTP1/OBG GTP-binding protein family signature 172 187 IPR006073 GO:0005525
Phco9g00672 637 PRINTS GTP1/OBG GTP-binding protein family signature 145 163 IPR006073 GO:0005525
Phco9g00672 637 PRINTS GTP1/OBG GTP-binding protein family signature 124 144 IPR006073 GO:0005525
Phco9g00672 637 FunFam Nucleolar GTP-binding protein 1 115 327 - -
Phco9g00672 637 Gene3D - 1 114 - -
Phco9g00672 637 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 122 308 IPR031167 GO:0005525
Phco9g00672 637 MobiDBLite consensus disorder prediction 523 552 - -
Phco9g00672 637 Pfam NOGCT (NUC087) domain 363 416 IPR012973 -
Phco9g00672 637 Pfam Nucleolar GTP-binding protein 1 (NOG1) 189 245 IPR010674 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00672 Phco-Chr9 4997421 4999741 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00672 9 4997421 4999741 Phco9g00672 9 4997421 4999741 ECH