Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00670 ATGGCACACACTCTAACACTACCACCCATCTCTTACACTCTCGCTAAAACCCTAAACCCCATTTCCCCATTCCACAAATCTCTTCCCTTCTCCTCTTCAATCATTTCTCGCCAAAAGACCACTCGCCGCTCCCTATCCCGCTCCGTCCTGCGCTCTACCGCCGCCGAATTCTCCGACAGTGTCGACGACGAAGAAGAATCGGAGGAACTGGGCGAGCTCGATGTCATCGCCCTCGAACAAGAAGCAAAGGACGCTGCCCAAGCTTATTCAAGCTCTCTGTCTCAAGTTCTGAGCATTGAAGACGAGGAGAAAAATGATCGCAAGGAAACAGCTCAATCCCGCAGTAGAAGTGCACGTAGAACAAAATCTATCCCGGAAAATCTTCTCCAAAGGGTCGCAGTTGTTGGAAGGCCAAATGTTGGCAAGTCAGCATTGTTTAATCGTCTTGTTGGGAGAAACAGGGCTATTGTGGTGGATGAGCCTGGGGTTACTAGGGATCGTTTATATGGTCGATCGTATTGGGGAGAGCATGAATTCATGGTAGTGGACACAGGCGGGGTTATCACTGTTTCAAAGTCACAAGCTACTGTTATGGAAGAGCTGGCTATTACTACTACCATTGGTATGGATGGCATTCCGCTTTCTGTTAGGGAAGCAGCTGTTGCCAGGATGCCCTCAATGATCGAGAGACAAGCAACTGCAGCTGTGGAAGAATCATCTGTTATTATTTTCCTGGTCGATGGTCAGGCAGGACTAACAGCAGCTGATGAGGAGATTGCTGATTGGTTGCGTAAAAACTACTCAGATAAACATGTCATTCTCGCAGTTAATAAGTGTGAATCTCCCCGCAAAAGAATTATCCAGGCATCTGAATTTTGGTCCCTTGGATTTGAACCACTTCCAATATCAGCAATCTCAGGGACGGGAACAGGAGAGCTTCTTGACCTTGTTTGTTCTGGCTTACAGAAAGTTGAGGAATCAAATATTCTTGAAGAAGAAGAAGAATATGTTCCGGCAATTTCAATTGTTGGTAGGCCAAATGTTGGCAAAAGTAGCATTTTGAATGCATTGGTTGGTGAGGACAGAACAATAGTTAGCCCCATCAGTGGCACTACTCGTGATGCTATTGATACTGAATTTACTGGACCAGATGGACAGAAGTTCCAACTTATCGATACTGCTGGAATCAGGAAAAGAGCGGCCATAGCTTCAGCTGGGAGTACAACAGAGGCTTTGTCAGTTAATCGAGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCTCTTGTCATCGAGGCCATGGCTTGTATCACAGAACAGGACTACAAGATAGCTGAGAGGATAGAAAAAGAAGGAAAAGGTTGTGTGATAGTTGTAAACAAGTGGGATACAATACCAAATAAAAAGCAGCAGACTGCATTACACTATGAGGAAGATGTCAGGGAGAAGCTTCGCTCACTTGATTGGGCTCCAATTGTTTATTCTACTGCTATAGCTGGTCATAGTGTTGACAAGATAATTGTTGCAGCCAGTGAAGTTGAAAAGGAAAGATCTAGAAGACTTGGCACTTCTATATTGAATCAAGTAGTTCTGGAAGCAGTAGCTTTTAAGCCTCCTCCTAGGACACGTGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCCATAAGGCCACCTACATTTGTCTTCTTCGTCAATGATGCAAAACTTTTTCCTGAGACTTACAGGCGCTATATGGAGAGGCAGCTGCGTACGGACGCAGGTTTTTCTGGAACACCCATACGACTGCTATGGCGCAGCAGAAGGAAAATGGGCAAAGATGAGAGCAAAGCTGTAACAAGGACCCAAGAGAATCTTACATCAAATGATCCGAAATTGTTATCAACTGCACCATAA 1902 0.4527 MAHTLTLPPISYTLAKTLNPISPFHKSLPFSSSIISRQKTTRRSLSRSVLRSTAAEFSDSVDDEEESEELGELDVIALEQEAKDAAQAYSSSLSQVLSIEDEEKNDRKETAQSRSRSARRTKSIPENLLQRVAVVGRPNVGKSALFNRLVGRNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGIPLSVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKNYSDKHVILAVNKCESPRKRIIQASEFWSLGFEPLPISAISGTGTGELLDLVCSGLQKVEESNILEEEEEYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRAAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKKQQTALHYEEDVREKLRSLDWAPIVYSTAIAGHSVDKIIVAASEVEKERSRRLGTSILNQVVLEAVAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMERQLRTDAGFSGTPIRLLWRSRRKMGKDESKAVTRTQENLTSNDPKLLSTAP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00670 633 Hamap GTPase Der [der]. 129 604 IPR016484 GO:0005525
Phco9g00670 633 MobiDBLite consensus disorder prediction 607 633 - -
Phco9g00670 633 Gene3D - 128 333 IPR027417 -
Phco9g00670 633 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 338 518 IPR031166 GO:0005525
Phco9g00670 633 CDD EngA2 340 513 - -
Phco9g00670 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 321 IPR027417 -
Phco9g00670 633 FunFam GTPase Der 127 328 - -
Phco9g00670 633 Pfam 50S ribosome-binding GTPase 340 461 IPR006073 GO:0005525
Phco9g00670 633 Pfam 50S ribosome-binding GTPase 131 278 IPR006073 GO:0005525
Phco9g00670 633 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 130 325 IPR031166 GO:0005525
Phco9g00670 633 CDD EngA1 133 321 - -
Phco9g00670 633 Gene3D - 334 518 IPR027417 -
Phco9g00670 633 FunFam GTPase Der 333 515 - -
Phco9g00670 633 MobiDBLite consensus disorder prediction 99 122 - -
Phco9g00670 633 PANTHER GTPASE DER 103 624 - -
Phco9g00670 633 Gene3D - 520 604 IPR015946 -
Phco9g00670 633 FunFam GTPase Der 516 604 - -
Phco9g00670 633 NCBIfam small GTP-binding protein domain 338 506 IPR005225 GO:0005525
Phco9g00670 633 PRINTS GTP1/OBG GTP-binding protein family signature 390 405 IPR006073 GO:0005525
Phco9g00670 633 PRINTS GTP1/OBG GTP-binding protein family signature 340 360 IPR006073 GO:0005525
Phco9g00670 633 MobiDBLite consensus disorder prediction 99 121 - -
Phco9g00670 633 MobiDBLite consensus disorder prediction 616 633 - -
Phco9g00670 633 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 520 601 IPR032859 -
Phco9g00670 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 607 IPR027417 -
Phco9g00670 633 NCBIfam ribosome biogenesis GTPase Der 223 600 IPR016484 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00670 Phco-Chr9 4978185 4984601 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00670 9 4978185 4984601 Phco9g00670 9 4978185 4984601 ECH