Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00630 ATGATGGCATTGCATTTGGACTTGTTTCTGTTGCTCTGCGTTTTGTCACTTTTTGTTACCTCCTTCGTCAACATCACTCATTCCAAGGCCATTGCACCCATTCTTGACGCTTCATTTCTCAACCGGAGCAGTTTTCCCCAAGGCTTTGTTTTTGGGGCAGCATCCTCGGCATACCAGTATGAAGGTGCTGCAAGGGAAGGTGGAAGAGGACCCAGTATATGGGATACTTTCACTCATAAATACCCACAAAAAATAAAAGATGGAAGTAATGGAGATGTAGCAGACGACTCATATCATCGGTACAAGGAGGATATTGGTATCATGAAGTACATGAATTTGGATGCTTATAGATTTTCCATTTCCTGGTCTAGGATTTTACCGAAAGGAAAGCTTAGTGCAGGTGTAAACCAAGAAGGAATAAACTACTACAACAACCTTATCAATGAGCTAATGGCTAATGGTCTGCAACCATATGTGACCCTTTTTCATTGGGACGTTCCCCAAGCCTTAGAGGATGAGTATGGCGGTTTCTTAAACCGTCACATTGTAGATGATTTTAGGGACTATGCTGAGGTTTGCTTCAAGGAATTTGGTGATAGGGTGAAACATTGGATTACTTTGAATGAACCAAGGAGTGTGAGCAAGAATGGCTATGCAAATGGTAGGTTTGCACCTGGTCGGTGTTCTGATTGGTTAAAACTGAACTGCACTGGTGGTGATTCCGGAACTGAGCCCTATTTGACTTCACACTACCAACTTCTTGCTCATGCTGCTGCTGCCAAACTGTATAAGACCAAGTATCAGGCATCTCAAAAGGGTTTAATAGGGATTACCTTGAATTCTGACTGGTATGTTCCGGTTTCAAAAGAGAAATCGGATCGAGATGCTGCACGTCGAGGCCTTGACTTCATGTTTGGATGGTTTATGGAACCACTCACTAAAGGTGAGTATCCAAAGAGTATGCGATCTATGTTGGGAAGCCGGCTACCAGAGTTCACCAGAGAAGAGTCCAGACAACTCAAAGGGTCATTTGATTTTCTGGGCCTAAACTACTACTCATCCTTTTATGCTGCTTATGCACCTCACGAACTTGGTGTCAGACCAGCCTTACAAACTGATTCTCTTGTTAATGTTACAAGTAATAATCAAGTTGTTTATATGCCTGAACTAGCTGCTTCTAACTGGTTGTGCATTTATCCACGAGGATTCCGACGACTGTTGCTTTTCATCAAGAAGCACTACAACAACCCTGTAATTTACATTACTGAAAACGGTTATGACGAGGTGAACGATCCAACACTTTCACTTGAAGAAAGCCTTATCGATACATACAGAGTTGATTACTTATACCGGCATCTTTATTTTCTTCAAACTGCAATCAAGGGTGGTGTGAATGTAAAGGGATATTTTGTGTGGTCATTGCTGGATAACTTGGAGTGGGACTCTGGCTATAGTGTGCGATTCGGACTCGTCTTTGTGGATTTCAAAGATGGCTTGAAAAGATACCCCAAATTCTCGGCACATTGGTTCAAGAATTTCCTCAGTAAATCTTAG 1554 0.4221 MMALHLDLFLLLCVLSLFVTSFVNITHSKAIAPILDASFLNRSSFPQGFVFGAASSAYQYEGAAREGGRGPSIWDTFTHKYPQKIKDGSNGDVADDSYHRYKEDIGIMKYMNLDAYRFSISWSRILPKGKLSAGVNQEGINYYNNLINELMANGLQPYVTLFHWDVPQALEDEYGGFLNRHIVDDFRDYAEVCFKEFGDRVKHWITLNEPRSVSKNGYANGRFAPGRCSDWLKLNCTGGDSGTEPYLTSHYQLLAHAAAAKLYKTKYQASQKGLIGITLNSDWYVPVSKEKSDRDAARRGLDFMFGWFMEPLTKGEYPKSMRSMLGSRLPEFTREESRQLKGSFDFLGLNYYSSFYAAYAPHELGVRPALQTDSLVNVTSNNQVVYMPELAASNWLCIYPRGFRRLLLFIKKHYNNPVIYITENGYDEVNDPTLSLEESLIDTYRVDYLYRHLYFLQTAIKGGVNVKGYFVWSLLDNLEWDSGYSVRFGLVFVDFKDGLKRYPKFSAHWFKNFLSKS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00630 517 PANTHER GLYCOSYL HYDROLASE 44 516 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 Pfam Glycosyl hydrolase family 1 43 516 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Phco9g00630 517 SUPERFAMILY (Trans)glycosidases 33 515 IPR017853 -
Phco9g00630 517 FunFam Beta-glucosidase 12 31 516 - -
Phco9g00630 517 PRINTS Glycosyl hydrolase family 1 signature 463 480 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 PRINTS Glycosyl hydrolase family 1 signature 419 427 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 PRINTS Glycosyl hydrolase family 1 signature 487 499 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 PRINTS Glycosyl hydrolase family 1 signature 442 453 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Phco9g00630 517 Gene3D Glycosidases 25 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00630 Phco-Chr9 4619355 4623160 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00630 9 4619355 4623160 Phco9g00630 9 4619355 4623160 ECH