Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00629 ATGGCATTCAGTGGTTATTTCTTTATTGGCCTCCTTGCTCTTGTTCTTATAAATAGATGTTCCAAAGTTACATGCGAAGAAGCAGTTTCAGTGTCACCTATTGACCTTTCTCTAAATCGAAACAGTTTCCCTGAAGGTTTCATCTTTGGAGCGGGATCTTCTTCCTACCAGTTCGAAGGTGCAGCAAGAGAAGGTGGTAAAGGAACAAGTGTGTGGGATACTTTCACACACAAGCATCCAGATAAGATCAAGGATAGAAGCAACGGGGACGTTGCCATTGACTCATATCACCACTACAAAGAAGATGTAGGGATGATGAAGGATATGAATTTGGATTCATATAGATTTTCCATATCTTGGTCAAGGATTCTCCCAAGAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCAACTATTACAACAACTTTATCAATGAGTTACTGGCTAATGACATAAAACCATTTGTTACTCTTTTCCATTGGGATCTTCCCCAAGCATTGGAAGATGAGTATGGTGGCTTTTTGAGTCCACTGATAATGAAAGATTTTCGAGACTATGCAGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACATTGAACGAACCATGGAGTTATAGCTTATTTGGCTATGCAAATGGACGAATGGCACCAGGTCGTTGTTCTACTTGGATGAATTCAAATTGTACTGGTGGTGATTCTGCAACAGAGCCATATTTGGTTAGTCATCACCAACTTCTTGCTCATGCAGCAGTTGTAGGTGTCTACAAGACCAAGTATCAGACCTCTCAGAAAGGTGTGATAGGCATAACTGTTGTAGCTAACTGGTTTTTGCCACTAAGAGATAGTAAACTTGATCAAAAGGCTACTGAGAGAGCAATTGACTTCATGTATGGATGGTTTATGGATCCGCTAACATTTGGAGATTATCCAAAAAGCATGCACTCCCTTGTGGGAGCAAGATTGCCAAAGTTTACTGCTCAGCAAGCCAAACTACTGGTTGGTTCTTTTGATTTTATTGGTCTAAATTATTACTCTACCACGTATGCCTCTGATGCACCTCACCTAAGCAATATCAGACCTAGCTACATAACAGATTCTCTTGTCATTCTTGCTTATGAACGTGATGGGAAACCTATTGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAGAGGAATTCGTGATCTTTTACTATATACAAAGGAAAAATACAACAATCCTTTAATTTACATCACTGAGAATGGTATAAATGAGTACAATGATCCCACATTATCAGTTGAAGAATCTCTTATGGATATTTTTAGAATTGATTATCATTATCGTCATCTCTTTTATCTTAAATCTGCAATTAGGAATGGCACAAATGTAAAAGGATATTATGTGTGCTCTCTCTTTCTGGGCCTCTTTGCTCTTCTTCTTCTTAGATCTTCTAAAGTTACATGCGAAGAAGCAGTTTCAGTTTCTCCAACTATTGACATTTCACTCAATCGGAACACTTTCCCTCAAGGCTTCATCTTTGGAGCTGGATCTTCCTCCTACCAGTTCGAAGGTGCAGCAATGGAAGGTGGTAGAGGAGCAAGTGTATGGGATACTTTCACTCATAAATATCCAGGTAAGATCCAGGATAGAAGCAACGGAGACGTGGCCATCGACTCATATCATCTTTACAAGGAAGATGTTGGAATGATGAAGGATGTGAATTTGGATTCATACAGATTTTCCATATCTTGGTCAAGGATTCTCCCTAAAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATAAACTATTACAACAACCTTATCAATGAGTTACTTGCTAATGGTATAAAACCATTTGTGACTATTTTTCACTGGGATCTTCCCCAAGCACTGGAAGATGAGTATGGTGGTTTTTTAAGTCCACTGATAGTGAAGGATTTTCGAGATTATGCAGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACATTGAATGAGCCATGGAGTTACAGTCAAAATGGCTATGCAAATGGAGAAATGGCACCAGGTCGTTGTTCTGCATGGATGAATTCAAATTGCACAGGTGGTGATTCTGCAACGGAGCCATATTTGGTTACACATCACCAACTTCTTGCTCATGCAGCAGCTGTTCGTGTCTACAAGACTAAGTATCAGACATCTCAGAAGGGTGTGATAGGCATAACCTTGGTAGTTAATTGGTTTTTGCCACTCAGAGATACCAAATCTGATCAAAAGGCTGCTGAAAGAGCAATTGACTTCATGTATGGATGGTTCATGGATCCATTAACTTCTGGAGAATATCCAAAAAGTATGAGATCACTTGTGAGAACAAGATTGCCAAAGTTCACCACAGAGCAAGCTAGATTACTTGTTGGTTCATTCGATTTTATTGGTCTAAACTATTACTCTACAACATATGCCTCTGATGCACCTCAACTAAGCAATGCCAACCCTAGCTACATAACGGATTCTCTTGTCACTGCTGCATTTGAACGCGATGGGAAACCTATTGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAGAGGAATTCGTGATCTTTTATTATATACCAAGGACAAGTACAATAATCCTTTGATTTACATCACTGAGAATGGTGTAAATGAGTATAATGAACCCTCCTTATCACTTGAAGAATCTCTTATGGATACTTTCAGAATTGATTATCATTATCGTCATCTTTATTATATTTTATCAGCAATTAGGAATGGTGTAAATGTAAAGGGGTACTACGTATGGTCTTTCTTCGACAATTTTGAGTGGTCTTCAGGCTATACATCACGATTCGGAATGGTCTTCATAGATTATAAAAATGGTTTGAAAAGATATCAAAAACTTTCAGCAATGTGGTACAAGAACTTCCTCAAGAAAGAAACAAGACTTTATGGCTCTAGTAAATAA 2967 0.3832 MAFSGYFFIGLLALVLINRCSKVTCEEAVSVSPIDLSLNRNSFPEGFIFGAGSSSYQFEGAAREGGKGTSVWDTFTHKHPDKIKDRSNGDVAIDSYHHYKEDVGMMKDMNLDSYRFSISWSRILPRGKLSGGINQEGINYYNNFINELLANDIKPFVTLFHWDLPQALEDEYGGFLSPLIMKDFRDYAELCFKEFGDRVKYWVTLNEPWSYSLFGYANGRMAPGRCSTWMNSNCTGGDSATEPYLVSHHQLLAHAAVVGVYKTKYQTSQKGVIGITVVANWFLPLRDSKLDQKATERAIDFMYGWFMDPLTFGDYPKSMHSLVGARLPKFTAQQAKLLVGSFDFIGLNYYSTTYASDAPHLSNIRPSYITDSLVILAYERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYNDPTLSVEESLMDIFRIDYHYRHLFYLKSAIRNGTNVKGYYVCSLFLGLFALLLLRSSKVTCEEAVSVSPTIDISLNRNTFPQGFIFGAGSSSYQFEGAAMEGGRGASVWDTFTHKYPGKIQDRSNGDVAIDSYHLYKEDVGMMKDVNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNLINELLANGIKPFVTIFHWDLPQALEDEYGGFLSPLIVKDFRDYAELCFKEFGDRVKYWVTLNEPWSYSQNGYANGEMAPGRCSAWMNSNCTGGDSATEPYLVTHHQLLAHAAAVRVYKTKYQTSQKGVIGITLVVNWFLPLRDTKSDQKAAERAIDFMYGWFMDPLTSGEYPKSMRSLVRTRLPKFTTEQARLLVGSFDFIGLNYYSTTYASDAPQLSNANPSYITDSLVTAAFERDGKPIGIKIASDWLYVYPRGIRDLLLYTKDKYNNPLIYITENGVNEYNEPSLSLEESLMDTFRIDYHYRHLYYILSAIRNGVNVKGYYVWSFFDNFEWSSGYTSRFGMVFIDYKNGLKRYQKLSAMWYKNFLKKETRLYGSSK 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00629 988 Pfam Glycosyl hydrolase family 1 505 980 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 Pfam Glycosyl hydrolase family 1 40 473 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 PANTHER GLYCOSYL HYDROLASE 507 981 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 FunFam Beta-glucosidase 12 29 477 - -
Phco9g00629 988 SUPERFAMILY (Trans)glycosidases 503 978 IPR017853 -
Phco9g00629 988 ProSitePatterns Glycosyl hydrolases family 1 active site. 417 425 IPR018120 -
Phco9g00629 988 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 512 526 IPR033132 -
Phco9g00629 988 FunFam Beta-glucosidase 12 494 979 - -
Phco9g00629 988 Gene3D Glycosidases 493 979 - -
Phco9g00629 988 Gene3D Glycosidases 30 474 - -
Phco9g00629 988 SUPERFAMILY (Trans)glycosidases 38 472 IPR017853 -
Phco9g00629 988 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Phco9g00629 988 PRINTS Glycosyl hydrolase family 1 signature 905 916 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 PRINTS Glycosyl hydrolase family 1 signature 926 943 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 PRINTS Glycosyl hydrolase family 1 signature 950 962 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 PRINTS Glycosyl hydrolase family 1 signature 417 425 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Phco9g00629 988 ProSitePatterns Glycosyl hydrolases family 1 active site. 882 890 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00629 Phco-Chr9 4604922 4615057 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00629 9 4604922 4615057 Phco9g00629 9 4604922 4615057 ECH