Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00582 ATGAGCAAGGTTGCAGGGTTTGTGGCAACCTTATTCATGATGGTGATGATGATGGTGCCAAAAACCGAGAGTGCACTACATATAGATGACATCGTCACAACACAATTCTTCAACAACATAATCAATGAGGCCGATGGTGATTGTCCAGGGAAGAACTTCTACTCACGTGATGCTTTCCTCAAAGCTCACGATTCCTACCGTCGGTTTGGTAGTCTCAGAAATGAAGATGACTCCAAACGTGAAGTTGCAGCAGCTTTTGCTCATTTCACCCATGAAAGTGGACATTTTTGCTACATAGAAGAGATTGGAGGAGCATCAAGGGACTACTGTGATGAAAGCAACACTGAGTTTCCATGTGTCCCTAGCAAAGGGTACTATGGTCGTGGACCTATCCAACTATCATGGAACTTCAACTATGGACCAGCAGGGCAGAACATCGGTTTTGATGGGTTGAATGCTCCGGAGACAGTGGCCAATGACCCTGTTGTGTCCTTCAAGACAGCATTGTGGTACTGGATGGAGTTTGTGCGCCCTGTCATAAACCAGGGCTTTGGTGCAACCATTAGAGCCATCAATGGCCAACTTGAATGTGATCAAGGAAACCCTGCCACTGTCCAGGCTCGTGTCAATTACTACACCCACTATTGTTCTCAATTTGGTGTTGCTCCTGGTGACAATCTTGATTGCTAA 690 0.4594 MSKVAGFVATLFMMVMMMVPKTESALHIDDIVTTQFFNNIINEADGDCPGKNFYSRDAFLKAHDSYRRFGSLRNEDDSKREVAAAFAHFTHESGHFCYIEEIGGASRDYCDESNTEFPCVPSKGYYGRGPIQLSWNFNYGPAGQNIGFDGLNAPETVANDPVVSFKTALWYWMEFVRPVINQGFGATIRAINGQLECDQGNPATVQARVNYYTHYCSQFGVAPGDNLDC 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00582 229 ProSitePatterns Chitinases family 19 signature 1. 48 70 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco9g00582 229 Gene3D - 27 229 - -
Phco9g00582 229 FunFam Endochitinase (Chitinase) 100 159 - -
Phco9g00582 229 Pfam Chitinase class I 31 174 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco9g00582 229 Pfam Chitinase class I 182 229 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco9g00582 229 PIRSF Endochitinase 5 229 IPR016283 GO:0004568|GO:0005975
Phco9g00582 229 SUPERFAMILY Lysozyme-like 28 229 IPR023346 -
Phco9g00582 229 PANTHER CHITINASE-RELATED 26 229 - -
Phco9g00582 229 ProSitePatterns Chitinases family 19 signature 2. 163 173 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco9g00582 229 Gene3D Endochitinase, domain 2 100 157 - -
Phco9g00582 229 CDD chitinase_GH19 32 229 - -
Phco9g00582 229 FunFam Endochitinase PR4 16 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00582 Phco-Chr9 4224954 4225792 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00582 9 4224954 4225792 Phco9g00582 9 4224954 4225792 ECH