Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00546 ATGGAGGCTTTCTCCATACAGTCGCTCACCCTAACCACCATCCCCTCCTCTTTGTCACATAGAGGGGCCACTGAGAAACCTTTTGCCCATGTTAACCTTTCCCATTTCACAAGGTACCCTTGTACCACAAGGTCAACAAAACACAGAATTCGTTGCACCAAAACTCAAGCTTCAGGTTCAACAAAATCTAGTGTGGGTACTGCTGAGGGGATATCTGAGAAAACAGATTCCAAGGATGACAACTTAGTATTTGTTGCGGGTGCTACTGGTAAAGTTGGTTCACGGACAGTGAGGGAGCTGATAAAGCTTGGATTTAGAGTCAGAGCTGGAGTGCGGAGTGCTCAGAGGGCGGGTGCATTAATTGAGAGTGTTCAACAATTGAAGCTTGATGGTACAAGTGCAACTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAACCAGATACAATTGGATTGGCATTAGGCAATGCGTCAACGGTGATATGTACCATTGGTGCCAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTTTCGGATAGATTATCAGGCCACCAAAAATCTAATTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCATACTGGTTACTTCGCTGGGAACGAACAAAATTGGCTTCCCTGCAGCTATCCTCAATTTGTTTTGGGGAGTACTTATTTGGAAAAGGAAGGCAGAAGAAGCACTGCTGGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAGCGGCCTACTGATGCTTTCAAGGAAACTCATAATATAACCTTGTCAACGGAAGACACTTTATTTGGCGGTCTGGTGTCAAACCTTCAGATTGCTGAACTCTTGGCAGTCATGGCCAAGAATCGTGATCTATCATATTGTAAAATAGTGGAGGCAATTGCAGAGACAACTGCACCGCTGACTCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGCCCTTACATTTCTTCACCCAAGGTACCAGACATTCCAGCGGCCAGTTTTCCAGATCCTCCTGCTAGTGTTGTGACTGCGGAACCAAGTGTCACCACTGAGCAAGAAACTTCGCAACCTAAACCAGTGGCAAAACAGCCACTTTCTCCCTATACCGCTTATGATGATTTGAAGCCACCATCATCACCTGCTCCATCTCAGCCTGGTGGTGGGAAACAAGCAAAGATCAGTGAGACAGTGCCAAAACCAAGTGCTTCAGATACTCCGAGTAGTGTGCCAGGAGTAGATGGCATCACTCGAGCAACATTTTCATCCAAAGTGGAGACGCCTCTTTCTCCTTATGTAGCATATCCTGACTTAAAGCCTCCCACTTCACCATCTCCTAATGCACCAGTTGTATCAGTTTCCACATCTGCTGCAGCAGGTGTGCCACAGATAGACACAATATCAAGTAATGGAACACCCCAACTTTCAACTGCAGATGGACCAAAGGAAGAACATCCCCCCGAACCCAAGTCTAGACCACTGTCACCTTATACGATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGAAATTCCTAG 1587 0.4631 MEAFSIQSLTLTTIPSSLSHRGATEKPFAHVNLSHFTRYPCTTRSTKHRIRCTKTQASGSTKSSVGTAEGISEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFRVRAGVRSAQRAGALIESVQQLKLDGTSATGGGQAVEKLEIVECDLEKPDTIGLALGNASTVICTIGASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKVPDIPAASFPDPPASVVTAEPSVTTEQETSQPKPVAKQPLSPYTAYDDLKPPSSPAPSQPGGGKQAKISETVPKPSASDTPSSVPGVDGITRATFSSKVETPLSPYVAYPDLKPPTSPSPNAPVVSVSTSAAAGVPQIDTISSNGTPQLSTADGPKEEHPPEPKSRPLSPYTMYEDLKPPASPSPSFRNS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00546 528 MobiDBLite consensus disorder prediction 460 489 - -
Phco9g00546 528 CDD SDR_a5 83 298 - -
Phco9g00546 528 Gene3D - 79 330 - -
Phco9g00546 528 MobiDBLite consensus disorder prediction 409 439 - -
Phco9g00546 528 MobiDBLite consensus disorder prediction 54 71 - -
Phco9g00546 528 MobiDBLite consensus disorder prediction 338 528 - -
Phco9g00546 528 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 327 IPR036291 -
Phco9g00546 528 MobiDBLite consensus disorder prediction 356 375 - -
Phco9g00546 528 FunFam Protein TIC 62, chloroplastic 79 330 - -
Phco9g00546 528 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 467 IPR044719 -
Phco9g00546 528 MobiDBLite consensus disorder prediction 54 73 - -
Phco9g00546 528 Pfam NAD(P)H-binding 87 298 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00546 Phco-Chr9 3984933 3989461 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00546 9 3984933 3989461 Phco9g00546 9 3984933 3989461 ECH