Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00544 ATGCACTACCTTAGGATGTGTTTGGAAACAAATAAAAGAAGAAATATTAAGGCATGGTTTGTCACTGGGCATTCAGATGGGTTGAATATATGTTCTGTAATGCTATCTTTCATGGCTTTCTCTGCGCATATTTGCCGATTCCCTTCCTCACGTGCCGACATCGCTTTTCCAGAAACTCTCACCAGAATCCGGTGCCGGAAACCTTTCTCCATCCGATGCTCCGGCGATTCCGCTTCTGCGTCTGTGGGTTCCGAGTTCAACCCGAAGGTGTTTCGGAAGAACCTTACTCGGAGTAAAAATTATAACCGCAAAGGCTTTGGGTACAAGGAAGAGACCCTCCAACTCATGAATAGCGAATACACCAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTCGAGTATACATGGGGTAATGTCACAGTGAAGCTGGCCGAAGCATATGGATTCTGTTGGGGAGTTGAGAGGGCTGTTCAAATTGCTTATGAGGCCAGAAAACAGTTTCCCACTGAGACAATTTGGCTTACCAATGAAATCATCCACAATCCTACCGTTTCTAAGAGGCTAGAGGATATGAAAGTGAAGAATATTCCCCTGGAAGAAGGTTCTAAACAATTTGATGTTGTCGACAATGGTGATGTAGTCATATTGCCAGCTTTTGGAGCAGCAGTGGAAGAGATGTTGACTTTGAGTGAGAAAAATGTTCGGATTGTTGATACAACTTGTCCATGGGTTGCAAAGGTATGGAATTCTGTTGAAAAGCACAAGCAAGGAGATTATACATCTGTAATTCACGGTAAATATGGCCATGAGGAAACTGTGGCAACTGCTTCTTTTGCTGGAAAATATATAGTTGTGAAGAATATGTCAGAGGCTGAATATGTTTGTGACTATATTCTTGGTGGTGAACTGAATGGATCCAGTTCAACCAAAGAAGCATTGTTAGAGAAATTTAAATTTGCTGTTTCTAAGGGATTTGATCCAGACAAGGACCTAATGAAAGCTGGCATCGCAAATCAGACAACGATGCTCAAGGGAGAGACAGAAGAGATTGGGAAACTACTGGAGAGGACTATGATGCGCAAATATGGTGTGGAGAACATCAACGAGCACTTCATGAGCTTCAACACAATTTGTGATGCTACACAGGAACGACAAGATGCTATGTACAAACTGGTGAAGGAAGATGTGGATCTTATGTTAGTAGTTGGTGGATGGAACTCTAGCAATACATCACACCTGCAAGAGATAGCTGAGGAATATGGAATCCCTTCTTATTGGATTGACTGTGATCAAAGAATTGGTCCAGGAAACAAAATAGCACACAAGTTGAATCATGGAGAACTAGTGGAGAAAGAAAACTGGTTGCCTGAGGGTCCAATAACAATTGGTGTAACATCTGGTGCATCCACTCCAGACAAGGCTGTTGAAGATGCGCTCATCAAGATTTTTGAGTTGAAACGTAAAGAAGCTATGCAACTTGTGTAG 1488 0.422 MHYLRMCLETNKRRNIKAWFVTGHSDGLNICSVMLSFMAFSAHICRFPSSRADIAFPETLTRIRCRKPFSIRCSGDSASASVGSEFNPKVFRKNLTRSKNYNRKGFGYKEETLQLMNSEYTSDIIKTLKENGFEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWLTNEIIHNPTVSKRLEDMKVKNIPLEEGSKQFDVVDNGDVVILPAFGAAVEEMLTLSEKNVRIVDTTCPWVAKVWNSVEKHKQGDYTSVIHGKYGHEETVATASFAGKYIVVKNMSEAEYVCDYILGGELNGSSSTKEALLEKFKFAVSKGFDPDKDLMKAGIANQTTMLKGETEEIGKLLERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVKEDVDLMLVVGGWNSSNTSHLQEIAEEYGIPSYWIDCDQRIGPGNKIAHKLNHGELVEKENWLPEGPITIGVTSGASTPDKAVEDALIKIFELKRKEAMQLV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00544 495 NCBIfam 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 142 483 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Phco9g00544 495 Pfam LytB protein 142 480 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Phco9g00544 495 CDD lytB_ispH 142 483 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Phco9g00544 495 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 140 487 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Phco9g00544 495 Gene3D - 376 494 - -
Phco9g00544 495 Gene3D - 242 375 - -
Phco9g00544 495 Gene3D - 151 241 - -
Phco9g00544 495 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 41 493 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00544 9 3961131 3965149 Phco9g00544 9 3961131 3965149 ECH